Click here to switch to the map view.

The map label for this gene is ywpE [H]

Identifier: 52784415

GI number: 52784415

Start: 608251

End: 608883

Strand: Direct

Name: ywpE [H]

Synonym: BLi00602

Alternate gene names: 52784415

Gene position: 608251-608883 (Clockwise)

Preceding gene: 52784414

Following gene: 52784416

Centisome position: 14.4

GC content: 41.39

Gene sequence:

>633_bases
ATGTATAAAAAAATGATCGTTGCCGTGCTTGTCATATCAGGAATACTCTTCGTCTTGTCTCCTTTCATTAAAGAAAGCAT
CATCATCAATCTCAACAAGAATAAAAATTTTGATTTGACTGCTGAACAGGCGGAACAAAACAATGCACAAAAGGCTTCAT
TTGATTTTGAGGCGATTCAGCCGCCTTCTATTTTGGAAACAATAAAAGCCAGCCTCGATCGTGAATCAAAAGCGGTCATC
GGCCGGATCACCATAAGCAGCGTCAATCTCAAGCTTCCGATATTGAAGGGCACAACCAATCAAAATCTTCTTTACGGAGC
GACAACAATGCGACCCGATCAGAAAATGGGCGAAGGCAACTACCCGCTGGCAGGCCATCATATGAAGCGGGAGAGCCTCT
TATTCGGTCCCCTTCTCAACATTGAAAAAGGAGATACCGTTAAAATCACAGACTTTAAAAAAGACTATATATACGCTGTG
ACGTCGAAACAATTCATTTCTGAAATGGACACAGATGTGATTCAAGAGACGAAAAAAAAGGAAATTACACTGATTACATG
TGACAAAGCTGTGAGAACCGAAGGACGCCTTGCTGTCAAAGGAAAGCTGATTCATGTTGCTGTACACAGATAA

Upstream 100 bases:

>100_bases
TTTCTTCACAAGAAAGAAACAAAGAAAGGCGTAAACGAATCATTGAAGCACCTGATCATTGAACCGGTCAGGTGCTTTTT
TAAAGAAAGGACTGTGAGGC

Downstream 100 bases:

>100_bases
TTGAATGTCCGCTGCAGGCAGGCAAAAATACTGAGGGATTGCCCCTTGGTATTTTTTTATTGGGACTAAAATTCTATACA
TCACAAAAAAATGACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MYKKMIVAVLVISGILFVLSPFIKESIIINLNKNKNFDLTAEQAEQNNAQKASFDFEAIQPPSILETIKASLDRESKAVI
GRITISSVNLKLPILKGTTNQNLLYGATTMRPDQKMGEGNYPLAGHHMKRESLLFGPLLNIEKGDTVKITDFKKDYIYAV
TSKQFISEMDTDVIQETKKKEITLITCDKAVRTEGRLAVKGKLIHVAVHR

Sequences:

>Translated_210_residues
MYKKMIVAVLVISGILFVLSPFIKESIIINLNKNKNFDLTAEQAEQNNAQKASFDFEAIQPPSILETIKASLDRESKAVI
GRITISSVNLKLPILKGTTNQNLLYGATTMRPDQKMGEGNYPLAGHHMKRESLLFGPLLNIEKGDTVKITDFKKDYIYAV
TSKQFISEMDTDVIQETKKKEITLITCDKAVRTEGRLAVKGKLIHVAVHR
>Mature_210_residues
MYKKMIVAVLVISGILFVLSPFIKESIIINLNKNKNFDLTAEQAEQNNAQKASFDFEAIQPPSILETIKASLDRESKAVI
GRITISSVNLKLPILKGTTNQNLLYGATTMRPDQKMGEGNYPLAGHHMKRESLLFGPLLNIEKGDTVKITDFKKDYIYAV
TSKQFISEMDTDVIQETKKKEITLITCDKAVRTEGRLAVKGKLIHVAVHR

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 23507; Mature: 23507

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKMIVAVLVISGILFVLSPFIKESIIINLNKNKNFDLTAEQAEQNNAQKASFDFEAIQ
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCCCC
PPSILETIKASLDRESKAVIGRITISSVNLKLPILKGTTNQNLLYGATTMRPDQKMGEGN
CHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCHHCCCCC
YPLAGHHMKRESLLFGPLLNIEKGDTVKITDFKKDYIYAVTSKQFISEMDTDVIQETKKK
CCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCC
EITLITCDKAVRTEGRLAVKGKLIHVAVHR
EEEEEEECHHHCCCCEEEEEEEEEEEEEEC
>Mature Secondary Structure
MYKKMIVAVLVISGILFVLSPFIKESIIINLNKNKNFDLTAEQAEQNNAQKASFDFEAIQ
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCCCC
PPSILETIKASLDRESKAVIGRITISSVNLKLPILKGTTNQNLLYGATTMRPDQKMGEGN
CHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCHHCCCCC
YPLAGHHMKRESLLFGPLLNIEKGDTVKITDFKKDYIYAVTSKQFISEMDTDVIQETKKK
CCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCC
EITLITCDKAVRTEGRLAVKGKLIHVAVHR
EEEEEEECHHHCCCCEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]