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The map label for this gene is ydcK

Identifier: 52784385

GI number: 52784385

Start: 571496

End: 571957

Strand: Direct

Name: ydcK

Synonym: BLi00565

Alternate gene names: NA

Gene position: 571496-571957 (Clockwise)

Preceding gene: 52784384

Following gene: 52784390

Centisome position: 13.53

GC content: 46.1

Gene sequence:

>462_bases
ATGGATGAACAACAACTGCAGCAGCTGACAGAACAGCTTTCGCTCACATACTTTAAAAAACCGTTCCGGCACCGCGCTTA
CTTCAACAGCCGCCTGAAAACGACAGGAGGCAGGTATTTGCTGAATTCCCACAATATCGAGCTGAATAAAAAATACCTGA
CAGAACACGGGCAAAAAGAGCTTGAAGGCATCATCAAGCATGAATTGTGCCATTACCACCTCCATCTTGAAGGAAAAGGC
TACAAGCACCGCGACAAGGATTTTAGAACGCTATTAAAGGAAGTCGGTGCGCCGCGGTTCTGCACGCCGCTCGAAAAAGA
GAAAAAGCCGCAAAGAAAAGTACGCACATACAAGTGTGAAGCATGCGGACAAACGTTTCTCCGAAAGCGGAAAATGGATA
CAAGCCGTTACGTTTGCGGCAAGTGCGGAGGGAAAATAAAAGAAATCATAAAAAAGGGTTGA

Upstream 100 bases:

>100_bases
CCTCAGGCTCTTATCATAAGAGTATGGGTGTCGTGTATTAGTTTATGCCGCCCGGAATTTGTCCTGTTCAATGTTTTTAA
AAATGAGGTGGACCCAAGCA

Downstream 100 bases:

>100_bases
CTGATCAGGCTTGTCTATGATAAATTATAAAAGCCGTCGCAAGACGAGCCACAAAGACAAATTGTTCTTCTTGACACATT
TTGTCGACATATTTATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDEQQLQQLTEQLSLTYFKKPFRHRAYFNSRLKTTGGRYLLNSHNIELNKKYLTEHGQKELEGIIKHELCHYHLHLEGKG
YKHRDKDFRTLLKEVGAPRFCTPLEKEKKPQRKVRTYKCEACGQTFLRKRKMDTSRYVCGKCGGKIKEIIKKG

Sequences:

>Translated_153_residues
MDEQQLQQLTEQLSLTYFKKPFRHRAYFNSRLKTTGGRYLLNSHNIELNKKYLTEHGQKELEGIIKHELCHYHLHLEGKG
YKHRDKDFRTLLKEVGAPRFCTPLEKEKKPQRKVRTYKCEACGQTFLRKRKMDTSRYVCGKCGGKIKEIIKKG
>Mature_153_residues
MDEQQLQQLTEQLSLTYFKKPFRHRAYFNSRLKTTGGRYLLNSHNIELNKKYLTEHGQKELEGIIKHELCHYHLHLEGKG
YKHRDKDFRTLLKEVGAPRFCTPLEKEKKPQRKVRTYKCEACGQTFLRKRKMDTSRYVCGKCGGKIKEIIKKG

Specific function: Unknown

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPRTL_BACLD (Q65N43)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_077805.1
- RefSeq:   YP_090214.1
- STRING:   Q65N43
- EnsemblBacteria:   EBBACT00000055778
- EnsemblBacteria:   EBBACT00000062230
- GeneID:   3030476
- GeneID:   3097665
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi00565
- KEGG:   bli:BL05043
- NMPDR:   fig|279010.5.peg.698
- eggNOG:   COG3091
- GeneTree:   EBGT00050000002414
- HOGENOM:   HBG313700
- OMA:   HELVHYH
- ProtClustDB:   PRK04351
- BioCyc:   BLIC279010-1:BLI00565-MONOMER
- BioCyc:   BLIC279010:BL05043-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00745
- InterPro:   IPR006640
- SMART:   SM00731

Pfam domain/function: PF10263 SprT-like

EC number: NA

Molecular weight: Translated: 18173; Mature: 18173

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: ACT_SITE 68-68

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEQQLQQLTEQLSLTYFKKPFRHRAYFNSRLKTTGGRYLLNSHNIELNKKYLTEHGQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHCCHHH
LEGIIKHELCHYHLHLEGKGYKHRDKDFRTLLKEVGAPRFCTPLEKEKKPQRKVRTYKCE
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHH
ACGQTFLRKRKMDTSRYVCGKCGGKIKEIIKKG
HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MDEQQLQQLTEQLSLTYFKKPFRHRAYFNSRLKTTGGRYLLNSHNIELNKKYLTEHGQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHCCHHH
LEGIIKHELCHYHLHLEGKGYKHRDKDFRTLLKEVGAPRFCTPLEKEKKPQRKVRTYKCE
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHH
ACGQTFLRKRKMDTSRYVCGKCGGKIKEIIKKG
HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA