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The map label for this gene is ydaH [H]

Identifier: 52784333

GI number: 52784333

Start: 519176

End: 519985

Strand: Direct

Name: ydaH [H]

Synonym: BLi00513

Alternate gene names: 52784333

Gene position: 519176-519985 (Clockwise)

Preceding gene: 52784332

Following gene: 52784334

Centisome position: 12.3

GC content: 48.89

Gene sequence:

>810_bases
ATGGACTTTTTAACATCCAAGGTGCTATTGATTTTTTGTTTTCTGTTGTTGATCCATTCCATCGAAACGCTCGCTTACGC
TGCCCGGCTGTCAGGCGCGAGAGTCGGATTTATCGCATCGGCTCTGTCATTATTTAATGTGATGGTCATCGTCTCGAGAA
TGTCAAACATGGTTCAGCAGCCTGTGACGGGAAAGCTTGTTGATGTCGCGGGGGCGGATGCGCTTTCCCTCGTCGGTAGC
CAATTTCGGTTTTTGATCTTTGGTTCAACCGTCGGCACAATTTTCGGAATGCTGCTTCTGCCGACATTCGTCGCCGTATT
TTCGAGAGCGATTGTTCATTTGGCAGGAGAAAATGGCTCCGTTTTGCAAGTGTTTCGCAAGGCGTTTTCAAAAAATAGCT
TCAAGCATGCAAAGCATTATGCAAAAAGACCGAGCCTGGAATATGTGAAAGACTTTCGGTTCCGCTATATACCGAAACGG
CTGTTTGTCTTGAACATGGTCATTACGGCGATTTATACAATCGGCGTTCTTGCCGCTCTTTATGCGGGCGTCCTTGTGCC
CGAAAGGCATACGACCGCGGTGATGGCCTCCGGCCTTGTCAACGGGGTTGCGACGATGCTGCTCGCGCTGTTTGTCGATC
CAAAGGTGTCGGTACTTGCAGATGACGTAGCAAAAGGGAAGCGGAGCTATACGTATTTGAAATGGGCTTCGATCACAATG
GCAGCATCGAGGGTGGCCGGGACGATTTTTGCCCAAGTACTATTTATTCCCGCTTCTTACTATATCGCATGGATGACGAA
GTGGATGTAG

Upstream 100 bases:

>100_bases
TGATAATTGAGACCGCTTCGGCTTTTGCCGGAGCGGTTTTTGATTTGCCGAAACGTTTCCGTTTTAAAAACAGTCTTACC
TATAGACTGGAGGAAGGTAA

Downstream 100 bases:

>100_bases
TCGATTTTTGACGAAAAGATCAAAATTCGATCATTTTCATTACATTATGAAACAAATGAAAACAAAATATTATCTTTTTC
GACAGGGTTAGACAGCTTGA

Product: YdaH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDFLTSKVLLIFCFLLLIHSIETLAYAARLSGARVGFIASALSLFNVMVIVSRMSNMVQQPVTGKLVDVAGADALSLVGS
QFRFLIFGSTVGTIFGMLLLPTFVAVFSRAIVHLAGENGSVLQVFRKAFSKNSFKHAKHYAKRPSLEYVKDFRFRYIPKR
LFVLNMVITAIYTIGVLAALYAGVLVPERHTTAVMASGLVNGVATMLLALFVDPKVSVLADDVAKGKRSYTYLKWASITM
AASRVAGTIFAQVLFIPASYYIAWMTKWM

Sequences:

>Translated_269_residues
MDFLTSKVLLIFCFLLLIHSIETLAYAARLSGARVGFIASALSLFNVMVIVSRMSNMVQQPVTGKLVDVAGADALSLVGS
QFRFLIFGSTVGTIFGMLLLPTFVAVFSRAIVHLAGENGSVLQVFRKAFSKNSFKHAKHYAKRPSLEYVKDFRFRYIPKR
LFVLNMVITAIYTIGVLAALYAGVLVPERHTTAVMASGLVNGVATMLLALFVDPKVSVLADDVAKGKRSYTYLKWASITM
AASRVAGTIFAQVLFIPASYYIAWMTKWM
>Mature_269_residues
MDFLTSKVLLIFCFLLLIHSIETLAYAARLSGARVGFIASALSLFNVMVIVSRMSNMVQQPVTGKLVDVAGADALSLVGS
QFRFLIFGSTVGTIFGMLLLPTFVAVFSRAIVHLAGENGSVLQVFRKAFSKNSFKHAKHYAKRPSLEYVKDFRFRYIPKR
LFVLNMVITAIYTIGVLAALYAGVLVPERHTTAVMASGLVNGVATMLLALFVDPKVSVLADDVAKGKRSYTYLKWASITM
AASRVAGTIFAQVLFIPASYYIAWMTKWM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021260 [H]

Pfam domain/function: PF10997 DUF2837 [H]

EC number: NA

Molecular weight: Translated: 29574; Mature: 29574

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]