Click here to switch to the map view.

The map label for this gene is ydaG [H]

Identifier: 52784332

GI number: 52784332

Start: 518301

End: 518723

Strand: Direct

Name: ydaG [H]

Synonym: BLi00512

Alternate gene names: 52784332

Gene position: 518301-518723 (Clockwise)

Preceding gene: 52784330

Following gene: 52784333

Centisome position: 12.27

GC content: 47.04

Gene sequence:

>423_bases
ATGGATCAGCAGCAATTGAAGAACAAGGTGCTTGATATTCTCGATCATCATAAAATCGGTTCGCTTGCAACGGTTGAAAG
CGGCAAGCCTCATTCCCGCTACATGACCTTTTTCCATGACGGGCTGACGCTTTATACACCGACAAGCGATGAGACGCACA
AGGCGGAAGAGATTGATAACAATCCGAACGTCCACGTGCTGTTGGGTTATAACGGCGAAGGATTAGGCGATGCATACCTT
GAAATTACAGGTACGGCAAAGCTCAACCATTCAAAGGATTTAAAGGACAAAATTTGGGATGAAAGGCTTGAGCAATGGTT
TGACGGAAAGGACGATCCGAACTTGACCGTGCTTGAGATTGAGCCTTCGGAAATCAGACTGATGAATGAAGGCGAAAGCA
CCCCGGTCACGCTTGACATGTAG

Upstream 100 bases:

>100_bases
TATGAAAATATTCACGTCAAAAACCTCCATTCAATTGTTTAATATACAAGACATTGTGGAAAAGTAACAGTGGAGACGAT
ACAAAGGAGGGAACCTCAAA

Downstream 100 bases:

>100_bases
CACTGTGCTCAATCAGTTTGTCATAAAGGGCGAACTGTAGTATAATAAAAAACAGGAACACGCAAAAGAGCAAATAAATG
GAAAGTAAACTTCTTTTTTC

Product: YdaG

Products: NA

Alternate protein names: GSP26 [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDQQQLKNKVLDILDHHKIGSLATVESGKPHSRYMTFFHDGLTLYTPTSDETHKAEEIDNNPNVHVLLGYNGEGLGDAYL
EITGTAKLNHSKDLKDKIWDERLEQWFDGKDDPNLTVLEIEPSEIRLMNEGESTPVTLDM

Sequences:

>Translated_140_residues
MDQQQLKNKVLDILDHHKIGSLATVESGKPHSRYMTFFHDGLTLYTPTSDETHKAEEIDNNPNVHVLLGYNGEGLGDAYL
EITGTAKLNHSKDLKDKIWDERLEQWFDGKDDPNLTVLEIEPSEIRLMNEGESTPVTLDM
>Mature_140_residues
MDQQQLKNKVLDILDHHKIGSLATVESGKPHSRYMTFFHDGLTLYTPTSDETHKAEEIDNNPNVHVLLGYNGEGLGDAYL
EITGTAKLNHSKDLKDKIWDERLEQWFDGKDDPNLTVLEIEPSEIRLMNEGESTPVTLDM

Specific function: Unknown

COG id: COG3871

COG function: function code R; Uncharacterized stress protein (general stress protein 26)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 15905; Mature: 15905

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQQLKNKVLDILDHHKIGSLATVESGKPHSRYMTFFHDGLTLYTPTSDETHKAEEIDN
CCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHEEEEEECCEEEEECCCCCCCCHHHCCC
NPNVHVLLGYNGEGLGDAYLEITGTAKLNHSKDLKDKIWDERLEQWFDGKDDPNLTVLEI
CCCEEEEECCCCCCCCCEEEEEEECEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
EPSEIRLMNEGESTPVTLDM
CHHHEEEEECCCCCCEEEEC
>Mature Secondary Structure
MDQQQLKNKVLDILDHHKIGSLATVESGKPHSRYMTFFHDGLTLYTPTSDETHKAEEIDN
CCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHEEEEEECCEEEEECCCCCCCCHHHCCC
NPNVHVLLGYNGEGLGDAYLEITGTAKLNHSKDLKDKIWDERLEQWFDGKDDPNLTVLEI
CCCEEEEECCCCCCCCCEEEEEEECEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
EPSEIRLMNEGESTPVTLDM
CHHHEEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8012595 [H]