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The map label for this gene is 52784202

Identifier: 52784202

GI number: 52784202

Start: 358526

End: 358948

Strand: Direct

Name: 52784202

Synonym: BLi00380

Alternate gene names: NA

Gene position: 358526-358948 (Clockwise)

Preceding gene: 52784201

Following gene: 52784203

Centisome position: 8.49

GC content: 41.13

Gene sequence:

>423_bases
GTGAATACGGAACAAACCATAGAAGTGATGAATCAGAACTGGACGGATATTTACTACCATCTGCACATGAAACATGATGA
TCAATTGTCTCACCAAGCGGTTCGGATGCTTCAGCATATCGAAAAAAACCGCTTTGTGACCATTGGCCATTTAGCAAGAT
TGTTGGATGTCTCTCATAATACGGCATCAGAACATGTGAAAAGACTAATACAAAAAGGGCTTGTACAGAAAAACAGGGAC
AGCAGCGATGAACGCAAAGTCTACGTCACGTTAACGCCTGAAGGTGAAGAAGCAGTGAAACGGCATACGAGACTTAATCC
GAAAAAACTGCAAAAGGTGCTGGAGCAATTAAATGAGGAAGAAGTCGAAATGGTTAAAACAGCATTTTCCTTGTTAAGCC
GGGAGGCAAAATCATGTTTTTAA

Upstream 100 bases:

>100_bases
TGAAATAAATAAAAGCGAACACCCGGTGAAGCCGGGTTTTTTTATGTCTTGATTTAAGAATATATCGTATTATAAGATGT
AATTAGAGAGGGTGATGAAA

Downstream 100 bases:

>100_bases
TAGTAAAAATCGGGGTTTCTGCAATATTGATTGCCATTATAACCGAGATTGCACGAAAATCGCCTGAAATGGGCGGAATG
ATTGCGGCTTTGCCGCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator TrmB

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNTEQTIEVMNQNWTDIYYHLHMKHDDQLSHQAVRMLQHIEKNRFVTIGHLARLLDVSHNTASEHVKRLIQKGLVQKNRD
SSDERKVYVTLTPEGEEAVKRHTRLNPKKLQKVLEQLNEEEVEMVKTAFSLLSREAKSCF

Sequences:

>Translated_140_residues
MNTEQTIEVMNQNWTDIYYHLHMKHDDQLSHQAVRMLQHIEKNRFVTIGHLARLLDVSHNTASEHVKRLIQKGLVQKNRD
SSDERKVYVTLTPEGEEAVKRHTRLNPKKLQKVLEQLNEEEVEMVKTAFSLLSREAKSCF
>Mature_140_residues
MNTEQTIEVMNQNWTDIYYHLHMKHDDQLSHQAVRMLQHIEKNRFVTIGHLARLLDVSHNTASEHVKRLIQKGLVQKNRD
SSDERKVYVTLTPEGEEAVKRHTRLNPKKLQKVLEQLNEEEVEMVKTAFSLLSREAKSCF

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16488; Mature: 16488

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEQTIEVMNQNWTDIYYHLHMKHDDQLSHQAVRMLQHIEKNRFVTIGHLARLLDVSHN
CCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
TASEHVKRLIQKGLVQKNRDSSDERKVYVTLTPEGEEAVKRHTRLNPKKLQKVLEQLNEE
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCHH
EVEMVKTAFSLLSREAKSCF
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTEQTIEVMNQNWTDIYYHLHMKHDDQLSHQAVRMLQHIEKNRFVTIGHLARLLDVSHN
CCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
TASEHVKRLIQKGLVQKNRDSSDERKVYVTLTPEGEEAVKRHTRLNPKKLQKVLEQLNEE
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCHH
EVEMVKTAFSLLSREAKSCF
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA