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The map label for this gene is ycgM

Identifier: 52784195

GI number: 52784195

Start: 350036

End: 350953

Strand: Direct

Name: ycgM

Synonym: BLi00373

Alternate gene names: NA

Gene position: 350036-350953 (Clockwise)

Preceding gene: 52784194

Following gene: 52784196

Centisome position: 8.29

GC content: 45.86

Gene sequence:

>918_bases
ATGGAAGTGATAACAAGAGACTTTTTCCTATTCTTATCTAAAAGCAGCATCCTGAATCGCCTGGCGAGAAATTGGGGGAG
TTCCGTCGCGACCGGAAAAATTATCGGAGGAAAAGATTTTGAAGCTTCAATTCCGATTATTAAGGGGCTTAACGAACAAG
GGCTGACTGTGACAGTCGATCACTTGGGCGAATTTGTGAACAGCAGGGAAGTCGCAAGGGAGCGCACGCAGGAATGCATT
CGGGCCATTCAGCTGATTGCTCAGGAACAGCTTAATTCACATGTTTCATTAAAGATGACGTCATTGGGACTCGATATTGA
CCTTGACCTTGTCAGGGATAATATGAACAGTATTCTGGAATGTGCCGAGCAGCACCAAGTGATGGTCACAATCGATATGG
AGGATGAAGTGCGCTGCCAAAAGACGCTTGACCTCTTTAAGGAGTTCAGGCAGAAATACGAGTATGTCAGCACCGTCCTG
CAGGCTTATTTGTACCGGACCGAACAGGATTTGGAGGAGCTCAATTCATTAAATCCGTTTTTCCGTCTTGTGAAGGGAGC
TTATAAAGAATCGCCGAAAGTGGCTTTCCCTGACAAAAAGGATGTGGATGAGAATTACAAAAAGCTCATTAAAAAGCAGC
TGCTGAGCGGCCATTACACAGCTATCGCAACTCATGACGACAAGATGATTGATTTCGCCAAAGAAATTGCGAATGAGCAT
CAAATCGGCAAAGACCGCTTCGAATTTCAAATGCTGTACGGGATGCGCAGCAAAACTCAGCTGGAACTGGTGAAGGAAGG
CTACAATATGCGCGTGTATCTTCCTTACGGAGACGACTGGTACGGATACTTTATGAGACGGCTTGCTGAGCGGCCTGCCA
ACATCGCTTTTGCGTTTAAAGGCATGACGAAGAAATAA

Upstream 100 bases:

>100_bases
CGTCAGCTTTTTTGTTTTTTCGAAATATTGTGAATCGACCCTTGGCTCTTATAAAATTAAGAATATAAAGAAATATTTCA
TGAGATGGCGGGGTGTGATA

Downstream 100 bases:

>100_bases
AACGATAAAAAGGGGAGATTAGCATGACAACACCTTACAAACACGAACCATTTACAAATTTCGGGATCGAAGAAAACCGG
AAGGCATTCGAAAAAGCTCT

Product: YcgM

Products: NA

Alternate protein names: PRODH 2; Proline oxidase 2 [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MEVITRDFFLFLSKSSILNRLARNWGSSVATGKIIGGKDFEASIPIIKGLNEQGLTVTVDHLGEFVNSREVARERTQECI
RAIQLIAQEQLNSHVSLKMTSLGLDIDLDLVRDNMNSILECAEQHQVMVTIDMEDEVRCQKTLDLFKEFRQKYEYVSTVL
QAYLYRTEQDLEELNSLNPFFRLVKGAYKESPKVAFPDKKDVDENYKKLIKKQLLSGHYTAIATHDDKMIDFAKEIANEH
QIGKDRFEFQMLYGMRSKTQLELVKEGYNMRVYLPYGDDWYGYFMRRLAERPANIAFAFKGMTKK

Sequences:

>Translated_305_residues
MEVITRDFFLFLSKSSILNRLARNWGSSVATGKIIGGKDFEASIPIIKGLNEQGLTVTVDHLGEFVNSREVARERTQECI
RAIQLIAQEQLNSHVSLKMTSLGLDIDLDLVRDNMNSILECAEQHQVMVTIDMEDEVRCQKTLDLFKEFRQKYEYVSTVL
QAYLYRTEQDLEELNSLNPFFRLVKGAYKESPKVAFPDKKDVDENYKKLIKKQLLSGHYTAIATHDDKMIDFAKEIANEH
QIGKDRFEFQMLYGMRSKTQLELVKEGYNMRVYLPYGDDWYGYFMRRLAERPANIAFAFKGMTKK
>Mature_305_residues
MEVITRDFFLFLSKSSILNRLARNWGSSVATGKIIGGKDFEASIPIIKGLNEQGLTVTVDHLGEFVNSREVARERTQECI
RAIQLIAQEQLNSHVSLKMTSLGLDIDLDLVRDNMNSILECAEQHQVMVTIDMEDEVRCQKTLDLFKEFRQKYEYVSTVL
QAYLYRTEQDLEELNSLNPFFRLVKGAYKESPKVAFPDKKDVDENYKKLIKKQLLSGHYTAIATHDDKMIDFAKEIANEH
QIGKDRFEFQMLYGMRSKTQLELVKEGYNMRVYLPYGDDWYGYFMRRLAERPANIAFAFKGMTKK

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 35419; Mature: 35419

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVITRDFFLFLSKSSILNRLARNWGSSVATGKIIGGKDFEASIPIIKGLNEQGLTVTVD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHCCCCCCCEEEHH
HLGEFVNSREVARERTQECIRAIQLIAQEQLNSHVSLKMTSLGLDIDLDLVRDNMNSILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH
CAEQHQVMVTIDMEDEVRCQKTLDLFKEFRQKYEYVSTVLQAYLYRTEQDLEELNSLNPF
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FRLVKGAYKESPKVAFPDKKDVDENYKKLIKKQLLSGHYTAIATHDDKMIDFAKEIANEH
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
QIGKDRFEFQMLYGMRSKTQLELVKEGYNMRVYLPYGDDWYGYFMRRLAERPANIAFAFK
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEC
GMTKK
CCCCC
>Mature Secondary Structure
MEVITRDFFLFLSKSSILNRLARNWGSSVATGKIIGGKDFEASIPIIKGLNEQGLTVTVD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHCCCCCCCEEEHH
HLGEFVNSREVARERTQECIRAIQLIAQEQLNSHVSLKMTSLGLDIDLDLVRDNMNSILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH
CAEQHQVMVTIDMEDEVRCQKTLDLFKEFRQKYEYVSTVLQAYLYRTEQDLEELNSLNPF
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FRLVKGAYKESPKVAFPDKKDVDENYKKLIKKQLLSGHYTAIATHDDKMIDFAKEIANEH
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
QIGKDRFEFQMLYGMRSKTQLELVKEGYNMRVYLPYGDDWYGYFMRRLAERPANIAFAFK
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEC
GMTKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA