Click here to switch to the map view.

The map label for this gene is yczA [H]

Identifier: 52784131

GI number: 52784131

Start: 281968

End: 282129

Strand: Direct

Name: yczA [H]

Synonym: BLi00308

Alternate gene names: 52784131

Gene position: 281968-282129 (Clockwise)

Preceding gene: 52784130

Following gene: 52784132

Centisome position: 6.68

GC content: 45.06

Gene sequence:

>162_bases
ATGGTGATTGCAACGGACGATTTGGAAACGACATGTCCAAATTGCAATGGAAGCGGAAGAGAAGAGCCGGAGCCTTGTCC
AAAATGTTCGGGAAAAGGCGTGATTTTGACGGCGCAGGGCAGCACATTGCTCCATTTTATAAAAAAACATCTCAACGAAT
AA

Upstream 100 bases:

>100_bases
TGACGGGGGTTTTTTGCATTTTTAAGGAGGTGGTGGCCATGGAGGAAGGCTGGCCGGAGTGGCCGCATAATACTAAACGG
AAACGGAGGTGTGATCGTAA

Downstream 100 bases:

>100_bases
AAAGGACGGGTGTTTAGAGTTGAGTCGAGCAGAGAAGAGTACAGCTGAGCAGAGCGGCCATATTCAACACGGTGTTCGAA
AAGCGGCCGGGGTCGTTTTT

Product: YczA

Products: NA

Alternate protein names: Anti-TRAP protein; AT [H]

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MVIATDDLETTCPNCNGSGREEPEPCPKCSGKGVILTAQGSTLLHFIKKHLNE

Sequences:

>Translated_53_residues
MVIATDDLETTCPNCNGSGREEPEPCPKCSGKGVILTAQGSTLLHFIKKHLNE
>Mature_53_residues
MVIATDDLETTCPNCNGSGREEPEPCPKCSGKGVILTAQGSTLLHFIKKHLNE

Specific function: By forming a complex with tryptophan-activated TRAP, and masking its RNA binding site, it inhibts TRAP's RNA binding ability, thereby abolishing TRAP regulation of gene expression, leading to antitermination and increased trp operon expression. AT acts by

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001305 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5685; Mature: 5685

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIATDDLETTCPNCNGSGREEPEPCPKCSGKGVILTAQGSTLLHFIKKHLNE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MVIATDDLETTCPNCNGSGREEPEPCPKCSGKGVILTAQGSTLLHFIKKHLNE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11557884; 11786553 [H]