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The map label for this gene is gerD [H]

Identifier: 52784011

GI number: 52784011

Start: 155694

End: 156275

Strand: Reverse

Name: gerD [H]

Synonym: BLi00173

Alternate gene names: 52784011

Gene position: 156275-155694 (Counterclockwise)

Preceding gene: 52784013

Following gene: 52784007

Centisome position: 3.7

GC content: 38.49

Gene sequence:

>582_bases
ATGTTCAAGACCGCAATGCTATCGATAAGCTGTTTTCTGTTTCTATCTGTAACAGCTTGTGCTCCCACGGACCAAGCAGC
TGAGATGGACTATGATCAAACCAAAAAAATGGTTGTCGATATATTAAAGACAGATGACGGAAAAAAAGCGATTCAAGAAA
TATTAAATGATGACAAATTAAATGAAACACTTGTAATGGATGAAAAAACTGTCAAAGAAACCGTTGAAAAAACAATGACC
TCCAAAAAAGGAGCTGAATTTTGGAAAAAAGTCTTTGAAGATCCAAAATTCGCTGAAGGCTTTGCCAAAACACTTCAAAA
TGAACATGAAAAAGTGCTGAAAAAACTGATGAAAGATCCTGAGTACCAAAAAATGCTGATGCAGGTCATGCAGGATCCTG
AAATGGCCAAAAAATACGGTGAACTTGTCAGAAGCCAGGAATTCCGAAGCCACCTGCAGGAAGTCATATCTGACACTCTG
ACAAGCCCTCTTTACAGAAAGCAGTTTGAAGAGGAACTGAAAAAAGCTGCTGCTGAAAGCATGAAAGAAGAAATGAAAGG
CGGCGAAGAAAAACAAAGCTGA

Upstream 100 bases:

>100_bases
CCCCTAAATAAACCGCTGTAACAGCGATATTTTGTTATGTATAAATTTTTAAAAGACATTCATATTAAAGGTAAGACGAG
TTTTCGAAAGGAGCTTAAGC

Downstream 100 bases:

>100_bases
GCCGCTTTTCATTCCCTAAAAGCTTCTTCTGCGGAGGAAGCTTTTTTTGCTCTTTAAGCTTTTGCGCCAATGCTTTCGTC
GATTTTTTTGGCGATATCCA

Product: GerD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MFKTAMLSISCFLFLSVTACAPTDQAAEMDYDQTKKMVVDILKTDDGKKAIQEILNDDKLNETLVMDEKTVKETVEKTMT
SKKGAEFWKKVFEDPKFAEGFAKTLQNEHEKVLKKLMKDPEYQKMLMQVMQDPEMAKKYGELVRSQEFRSHLQEVISDTL
TSPLYRKQFEEELKKAAAESMKEEMKGGEEKQS

Sequences:

>Translated_193_residues
MFKTAMLSISCFLFLSVTACAPTDQAAEMDYDQTKKMVVDILKTDDGKKAIQEILNDDKLNETLVMDEKTVKETVEKTMT
SKKGAEFWKKVFEDPKFAEGFAKTLQNEHEKVLKKLMKDPEYQKMLMQVMQDPEMAKKYGELVRSQEFRSHLQEVISDTL
TSPLYRKQFEEELKKAAAESMKEEMKGGEEKQS
>Mature_193_residues
MFKTAMLSISCFLFLSVTACAPTDQAAEMDYDQTKKMVVDILKTDDGKKAIQEILNDDKLNETLVMDEKTVKETVEKTMT
SKKGAEFWKKVFEDPKFAEGFAKTLQNEHEKVLKKLMKDPEYQKMLMQVMQDPEMAKKYGELVRSQEFRSHLQEVISDTL
TSPLYRKQFEEELKKAAAESMKEEMKGGEEKQS

Specific function: May be involved in fructose recognition during germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22304; Mature: 22304

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTAMLSISCFLFLSVTACAPTDQAAEMDYDQTKKMVVDILKTDDGKKAIQEILNDDKL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHC
NETLVMDEKTVKETVEKTMTSKKGAEFWKKVFEDPKFAEGFAKTLQNEHEKVLKKLMKDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
EYQKMLMQVMQDPEMAKKYGELVRSQEFRSHLQEVISDTLTSPLYRKQFEEELKKAAAES
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MKEEMKGGEEKQS
HHHHHCCCCCCCC
>Mature Secondary Structure
MFKTAMLSISCFLFLSVTACAPTDQAAEMDYDQTKKMVVDILKTDDGKKAIQEILNDDKL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHC
NETLVMDEKTVKETVEKTMTSKKGAEFWKKVFEDPKFAEGFAKTLQNEHEKVLKKLMKDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
EYQKMLMQVMQDPEMAKKYGELVRSQEFRSHLQEVISDTLTSPLYRKQFEEELKKAAAES
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MKEEMKGGEEKQS
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2517635; 8969501; 9384377; 8576055; 7559346 [H]