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The map label for this gene is yocH [H]

Identifier: 52144532

GI number: 52144532

Start: 794371

End: 795603

Strand: Reverse

Name: yocH [H]

Synonym: BCZK0692

Alternate gene names: 52144532

Gene position: 795603-794371 (Counterclockwise)

Preceding gene: 52144528

Following gene: 52144540

Centisome position: 15.01

GC content: 40.71

Gene sequence:

>1233_bases
ATGAAAAAATTTATGGGTATAGCAACAGCAGCGGTTTTTGGTCTTGGGATTTTCACAACATCTGCTAAAGCAGAAACGTT
TGTAACAACTGATGTACTAAATGTACGAGAAAACCCAACTACTGAATCAAAAGTTGTAGGAAAATTATTAGATGGATATA
AAGTTAACGTTTTACATACAGAAAACGGATGGTCAAAAGTAAAATTGAATAGCGGTAAAGAAGCTTTCATTAGCGCTGAC
TACACAAAAGACACTTACTACGTAACAGCTAACGTATTAAACGTACGTGCTGGTGCAAACACAGACTCAGAAATTCTTGG
TAAATTGAAACAAGATGATGTAATTGAAACAACACACCAAGTTGAAAATGATTGGATCCAATTTGAATATAACGGAAAAA
CAGCTTATGTTCATGTTCCTTACTTAACAGGTAAAGCTCCAGTTAAAGTTCAACCAGCAGTAAAAGTTGAAAAAACAACG
AAAGTTCAAGATACAGCTAAAACTGTAGCAGCAACTAAAGCTCGTGAAGTAGCTGAAACGCAAGCAAAAGCTAAAGCTCA
GGAAGCAACTAAAGCTCGTGAAGCAGCTGAAGCTCAAGCAGCGGCTAAAGCCCAAGAGGCAGCTAAAGCTCGTGAAGCAG
CTAAAGCTCAAGAAGCAGCTAAAGCTCAGGCAGAAGCTGAAGCTCAAGCAGAAGCTAAGGCTCAAGAAGCAGCTAAAGCT
CGTGAAGCAGCTAAAGCTCAAGCAGAAGCTGAAGCTCAAGCAGCGGCTAAAGCCCAAGAGGCAGCTAAAGCTCGTGAAGC
AGCTAAAGCCCAGGCAGAAGCTGAGGCTCAAGCAGAAGCTAAGGCTCGTGAAGCGGCTAAAGCTCAAAAACCAGCTACAC
AGCAACCTGTTGCAAAAGAAACTGAAACAAGTGCACCATCATCTTCTCGTGAGTTACGCGTTGTAGCAACAGCTTACACA
GCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAAGTAAAATCAGCTTTAGGTCATAACTTAACAGCAAATCCAAA
CATGAAACTAATCGCAGTTGATCCAAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATCG
CTGGTGATACTGGTGGAGCTATTAAAGGAAATAAAATCGACGTTTTAATGCCAGACAAAGGTACATCAAGTAACTGGGGA
CGTAAAACAGTTACAGTTAAAGTATTAAACTAG

Upstream 100 bases:

>100_bases
TGACCCGTTACGAAAGCTTTGTAATTTTATGTTTTTCGCAAATAAGAAAATAATGGTTGCTATAATGAGGTCAACGAAAA
CAAATGCAATGGAGGCTATT

Downstream 100 bases:

>100_bases
TTCGTATAAAAAGAGTCAGTCTCATTGAGGCTGACTCTTTTTGCGTTCCTTCTAAAGAAAAATATACTTCTATCTGAAAT
TATATCAACGATTAAACAAG

Product: enterotoxin/cell wall-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKKFMGIATAAVFGLGIFTTSAKAETFVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHTENGWSKVKLNSGKEAFISAD
YTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKVEKTT
KVQDTAKTVAATKAREVAETQAKAKAQEATKAREAAEAQAAAKAQEAAKAREAAKAQEAAKAQAEAEAQAEAKAQEAAKA
REAAKAQAEAEAQAAAKAQEAAKAREAAKAQAEAEAQAEAKAREAAKAQKPATQQPVAKETETSAPSSSRELRVVATAYT
ADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGTSSNWG
RKTVTVKVLN

Sequences:

>Translated_410_residues
MKKFMGIATAAVFGLGIFTTSAKAETFVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHTENGWSKVKLNSGKEAFISAD
YTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKVEKTT
KVQDTAKTVAATKAREVAETQAKAKAQEATKAREAAEAQAAAKAQEAAKAREAAKAQEAAKAQAEAEAQAEAKAQEAAKA
REAAKAQAEAEAQAAAKAQEAAKAREAAKAQAEAEAQAEAKAREAAKAQKPATQQPVAKETETSAPSSSRELRVVATAYT
ADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGTSSNWG
RKTVTVKVLN
>Mature_410_residues
MKKFMGIATAAVFGLGIFTTSAKAETFVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHTENGWSKVKLNSGKEAFISAD
YTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKVEKTT
KVQDTAKTVAATKAREVAETQAKAKAQEATKAREAAEAQAAAKAQEAAKAREAAKAQEAAKAQAEAEAQAEAKAQEAAKA
REAAKAQAEAEAQAAAKAQEAAKAREAAKAQAEAEAQAEAKAREAAKAQKPATQQPVAKETETSAPSSSRELRVVATAYT
ADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGTSSNWG
RKTVTVKVLN

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 43283; Mature: 43283

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFMGIATAAVFGLGIFTTSAKAETFVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHT
CCHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEEE
ENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQ
CCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHH
VENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKVEKTTKVQDTAKTVAATKAREVAET
CCCCEEEEEECCEEEEEEEEEECCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHH
QAKAKAQEATKAREAAEAQAAAKAQEAAKAREAAKAQEAAKAQAEAEAQAEAKAQEAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAAKAQAEAEAQAAAKAQEAAKAREAAKAQAEAEAQAEAKAREAAKAQKPATQQPVAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPL
CCCCCCCCCCCEEEEEEEEECCHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEC
GSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGTSSNWGRKTVTVKVLN
CCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKFMGIATAAVFGLGIFTTSAKAETFVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHT
CCHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEEE
ENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQ
CCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHH
VENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKVEKTTKVQDTAKTVAATKAREVAET
CCCCEEEEEECCEEEEEEEEEECCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHH
QAKAKAQEATKAREAAEAQAAAKAQEAAKAREAAKAQEAAKAQAEAEAQAEAKAQEAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAAKAQAEAEAQAAAKAQEAAKAREAAKAQAEAEAQAEAKAREAAKAQKPATQQPVAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPL
CCCCCCCCCCCEEEEEEEEECCHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEC
GSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGTSSNWGRKTVTVKVLN
CCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]