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The map label for this gene is oppC [H]

Identifier: 52144148

GI number: 52144148

Start: 1187628

End: 1188644

Strand: Direct

Name: oppC [H]

Synonym: BCZK1079

Alternate gene names: 52144148

Gene position: 1187628-1188644 (Clockwise)

Preceding gene: 52144149

Following gene: 52144147

Centisome position: 22.4

GC content: 37.27

Gene sequence:

>1017_bases
ATGATGAAAGATGTACAAAAATTATCTCCAGATTTATTTCAACAAGCCAATCAAAATAATGTGGATAATGAAGTCATTGC
CCGTCCAAGCTTAACGTTTTGGCAAGATGTAAGAAGACGTTTGTTCCAACATAAAGGAGCAATGTTCGGTTTAGTTTTAT
TAACGCTTATTATCTTACTAGCAATTTTAGGACCGATGGTAAGTAAGCACTCGTATAAAGAGCAAGATTTAGGACGTGCG
AAATTACCACCGAAAATTCCAGTTATTGAAAATGTTCATTGGTTACCATTTGACGGTACAGATCAATACGGTGTTGACCA
ATATGAAAAACGTGATATTAAAGAGTATTTCTGGTTTGGTACAGATGATCTTGGCCGCGATTTATGGACAAGAACATGGG
AAGGTACGCGCGTATCATTATATATCGCTCTTTTAGCAGCAGCGATTGACTTAGTAATTGGGGTTGCATATGGAGGTATT
TCAGCATTTTATGGCGGTAGAGTAGATAACATTATGCAACGTATTATGGAGATTATTAACGGTATTCCATACTTAATCAT
CGTTATTTTAATGGTAATCATTATGGGATCTGGCATATGGTCAATTACACTCGCAATGGCGATTACAGGTTGGATAGGGA
TGTCGCGTATCGTTCGTGGACAAATCTTAAAATTAAAAAACCAAGAATACGTATTAGCATCTCGTACATTAGGTGCAACA
AACACACAATTAATTGTAAAACACTTAATCCCGAACGTAATGGGACCAATTATCGTAATGACAATGTTTACAATCCCAAC
AGCGGTGTTTGGTGAGGCATTCTTAAGCTTTATCGGTTTAGGTATCCAGCCACCATTCGCATCACTTGGTTCTCTTGTAA
ATGACGGTTATAAATCAATTCAAACGTATCCGCATATGATGTTCATCCCTGCGGTTGTCATCAGTATATTAATTTTAGCG
TTTAACTTAATGGCAGACGGATTACGCGACGCGTTAGATCCAAAAATGCGTAAGTAA

Upstream 100 bases:

>100_bases
CTACAATCTTCTATAGTGCGATTTTCATCTTAGTTATTTTCATTGTCGATATTTTATACGGAATTATTGATCCTCGAATT
CGTTTAGCGGGAGGGAAAAA

Downstream 100 bases:

>100_bases
AAGAGGGGAGAGGCAAAGATGAAAACATTGTTAGAGGTAAAAGATTTACAAGTCTCCTTTGATACACATGCAGGTGAAGT
ACAAGCTGTACGCGGCGTTA

Product: oligopeptide ABC transporter, permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILLAILGPMVSKHSYKEQDLGRA
KLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFGTDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGI
SAFYGGRVDNIMQRIMEIINGIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSIQTYPHMMFIPAVVISILILA
FNLMADGLRDALDPKMRK

Sequences:

>Translated_338_residues
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILLAILGPMVSKHSYKEQDLGRA
KLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFGTDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGI
SAFYGGRVDNIMQRIMEIINGIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSIQTYPHMMFIPAVVISILILA
FNLMADGLRDALDPKMRK
>Mature_338_residues
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILLAILGPMVSKHSYKEQDLGRA
KLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFGTDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGI
SAFYGGRVDNIMQRIMEIINGIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSIQTYPHMMFIPAVVISILILA
FNLMADGLRDALDPKMRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=328, Percent_Identity=35.0609756097561, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1787054, Length=328, Percent_Identity=29.8780487804878, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=34.9794238683128, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787760, Length=284, Percent_Identity=32.7464788732394, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1789964, Length=318, Percent_Identity=31.7610062893082, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788505, Length=278, Percent_Identity=27.3381294964029, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787549, Length=305, Percent_Identity=24.9180327868852, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37919; Mature: 37919

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILL
CCCHHHHCCHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AILGPMVSKHSYKEQDLGRAKLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFG
HHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCC
TDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGISAFYGGRVDNIMQRIMEIIN
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QTYPHMMFIPAVVISILILAFNLMADGLRDALDPKMRK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMKDVQKLSPDLFQQANQNNVDNEVIARPSLTFWQDVRRRLFQHKGAMFGLVLLTLIILL
CCCHHHHCCHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AILGPMVSKHSYKEQDLGRAKLPPKIPVIENVHWLPFDGTDQYGVDQYEKRDIKEYFWFG
HHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCC
TDDLGRDLWTRTWEGTRVSLYIALLAAAIDLVIGVAYGGISAFYGGRVDNIMQRIMEIIN
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GIPYLIIVILMVIIMGSGIWSITLAMAITGWIGMSRIVRGQILKLKNQEYVLASRTLGAT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
NTQLIVKHLIPNVMGPIIVMTMFTIPTAVFGEAFLSFIGLGIQPPFASLGSLVNDGYKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QTYPHMMFIPAVVISILILAFNLMADGLRDALDPKMRK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]