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The map label for this gene is oppA [H]

Identifier: 52144145

GI number: 52144145

Start: 1192582

End: 1194228

Strand: Direct

Name: oppA [H]

Synonym: BCZK1083

Alternate gene names: 52144145

Gene position: 1192582-1194228 (Clockwise)

Preceding gene: 52144146

Following gene: 52144143

Centisome position: 22.5

GC content: 35.88

Gene sequence:

>1647_bases
ATGAAAAAAAAGATGCCAGTTTTTGTAGTATCAACAGTAGCAATGAGCATGATGTTAGGGGCATGTAGCTACCAAAAAGA
TGAGCCGCAAGCGAACGCAAAAGGGGATAGCGGGAAAAGCGGTGCGAAGCAAGTTATTAACTTAATTGAAACGCAAGAAA
TTCCAACGATGGATCCAGCGTTGTCAGCTGATGCAGTTTCTTCAAGAGTAATGACTAATACGATGGAAGGCTTATACAGT
TTAGGAAAAGATGATAAGCTTGTTCCAGGTGTAGCGAAGGAATTCCAAAAGTCAGAAGACGGTAAAAAATATACATTTAA
ATTACGTGAAGACGCAAAATGGTCAAATGGTGAGCCTGTGACGGCAAAAGATTTCGTATACGCATGGCAAAGGGCAATTA
ACCCAGATACAGCTGCGAAATCAGCGTACATTATGTATGATATAAAAAATGCAGAGAAAATTAATAAAAAAGAGATGAGT
CCAGATCAATTAGGTGTAAAAGCGATTGATGATTATACATTAGAAGTGGAATTAGACAATTCCATTCCATACCTTGTAGA
TTTAATGGTATATCCAATCTTCTATCCTGTGAATGAAAAGTTTGTGAAAGAGCAAGGTACGAAGTTTGGTTTGGAAGCGA
ATACAACGCTTTATAACGGACCATTTACATTAAGTGATTGGCAACATGAGCGTAGCTTTAAAATGACAAAGAGTACGTCA
TATTGGGACAATAAAGAAGTGAAGATTGAGGAAGTAAATTTTAACATTGTAAAAGATACGTCTACGCCAATTAATTTATA
TGAAACAAACGCAGTCGATCGAGCGACGTTATTAGCAGAGTTCATCGATAAATATAAAGGAAAACCAGATTTCCAAACAG
TAGAGGATACATCTGTATTCTTCCTTCGTTTAAATCAAAAAGATCCAGCTTTAGCAAATAAAAATATTCGTAAAGCAATT
TCACTTGCTTTTGAACGTAAGCCGTTCGTTGATACATTATTAAATAACGGTTCTAAGCCAGCAACAGGATTAATTCCTGA
TAACTTCATTAAAGGACCGGATAAAAAAGACTTCCGTGCTGTAAATGGAGATATTGTAAAACCAAACGTGAAAGAAGCGA
AGAAATATTGGGAAGCTGGTAAAAAAGAGCTTGGTAAAAATGAAATCGAATTAGAGCTATTAAATGAAGACGTTGAATTA
TCGAAGAAAACAGGTGAATATTTAAAAGGTGAGTTAGAAAAGAATTTACCAGGTTTAACAGTGAAAATTAAACAACAACC
ATTCGCGCAAAAACTAAAATTAGAAGATGCGGGCGATTATGTCATGTCATTCTCTGGATGGAGTGCAGACTTCCCAGATC
CAGTTACATACCTTGATATGTTTGTGACGGATGGATCGCAAAATAAAATGAAATACTCTAATCCGAAATATGATGAAATT
ATCATGAAAGCGAAGAAAGATGGAAGCGATGTAAATGCTCGTTGGAAAAACTTACTAGAAGCAGAGAAGATGCTACTTGA
TGATGCTGCGATTGTTCCAGTATATCAACGAGGTAGAGCATACTTACAAAGAGATTCAATTAAAAATATGTACAATCATA
AATATGGCGGCGATTTAAGCTTTAAGTGGGCGTCAGTAGAGAAATAA

Upstream 100 bases:

>100_bases
AAAAAATATATTTGTGTGTATAATATGAATTGTTAGAACATATATATATTTCTTTTTGTTTGAAAATGAAAGGGCTAACA
TTTTTGTGGAGGGTGGAAGT

Downstream 100 bases:

>100_bases
GAAAAAAGCAGGCTAACCACCTGCTTTTTTTAATACGTACGTTTCTTATAAATACCTTTCCCACCGACCTCGTTCCAGCC
GGATTGCACATCCAAACTTT

Product: oligopeptide ABC transporter, oligopeptide-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MKKKMPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPALSADAVSSRVMTNTMEGLYS
LGKDDKLVPGVAKEFQKSEDGKKYTFKLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMS
PDQLGVKAIDDYTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLSDWQHERSFKMTKSTS
YWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVFFLRLNQKDPALANKNIRKAI
SLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVEL
SKKTGEYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDYVMSFSGWSADFPDPVTYLDMFVTDGSQNKMKYSNPKYDEI
IMKAKKDGSDVNARWKNLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLSFKWASVEK

Sequences:

>Translated_548_residues
MKKKMPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPALSADAVSSRVMTNTMEGLYS
LGKDDKLVPGVAKEFQKSEDGKKYTFKLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMS
PDQLGVKAIDDYTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLSDWQHERSFKMTKSTS
YWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVFFLRLNQKDPALANKNIRKAI
SLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVEL
SKKTGEYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDYVMSFSGWSADFPDPVTYLDMFVTDGSQNKMKYSNPKYDEI
IMKAKKDGSDVNARWKNLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLSFKWASVEK
>Mature_548_residues
MKKKMPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPALSADAVSSRVMTNTMEGLYS
LGKDDKLVPGVAKEFQKSEDGKKYTFKLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMS
PDQLGVKAIDDYTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLSDWQHERSFKMTKSTS
YWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVFFLRLNQKDPALANKNIRKAI
SLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVEL
SKKTGEYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDYVMSFSGWSADFPDPVTYLDMFVTDGSQNKMKYSNPKYDEI
IMKAKKDGSDVNARWKNLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLSFKWASVEK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=539, Percent_Identity=29.3135435992579, Blast_Score=212, Evalue=5e-56,
Organism=Escherichia coli, GI87081878, Length=537, Percent_Identity=27.0018621973929, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI1789397, Length=469, Percent_Identity=27.0788912579957, Blast_Score=186, Evalue=4e-48,
Organism=Escherichia coli, GI1787762, Length=481, Percent_Identity=23.2848232848233, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1787052, Length=322, Percent_Identity=24.5341614906832, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1789887, Length=401, Percent_Identity=24.4389027431421, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1789966, Length=445, Percent_Identity=22.4719101123595, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62082; Mature: 62082

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKMPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
LSADAVSSRVMTNTMEGLYSLGKDDKLVPGVAKEFQKSEDGKKYTFKLREDAKWSNGEPV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
TAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMSPDQLGVKAIDDYTLEVELDN
CHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHCCCEEECCEEEEEEECC
SIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLSDWQHERSFKMTKSTS
CCHHHHHHHHHHHEECCCHHHHHHCCCEECCCCCCEEECCCEECCCCCCCCCEEECCCCC
YWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVF
CCCCCCEEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
FLRLNQKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRA
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCEE
VNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVELSKKTGEYLKGELEKNLPGLT
CCCCEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCE
VKIKQQPFAQKLKLEDAGDYVMSFSGWSADFPDPVTYLDMFVTDGSQNKMKYSNPKYDEI
EEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHH
IMKAKKDGSDVNARWKNLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLS
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCE
FKWASVEK
EEECCCCC
>Mature Secondary Structure
MKKKMPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
LSADAVSSRVMTNTMEGLYSLGKDDKLVPGVAKEFQKSEDGKKYTFKLREDAKWSNGEPV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
TAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMSPDQLGVKAIDDYTLEVELDN
CHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHCCCEEECCEEEEEEECC
SIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLSDWQHERSFKMTKSTS
CCHHHHHHHHHHHEECCCHHHHHHCCCEECCCCCCEEECCCEECCCCCCCCCEEECCCCC
YWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVF
CCCCCCEEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
FLRLNQKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRA
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCEE
VNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVELSKKTGEYLKGELEKNLPGLT
CCCCEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCE
VKIKQQPFAQKLKLEDAGDYVMSFSGWSADFPDPVTYLDMFVTDGSQNKMKYSNPKYDEI
EEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHH
IMKAKKDGSDVNARWKNLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLS
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCE
FKWASVEK
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]