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The map label for this gene is trpB [H]

Identifier: 52144093

GI number: 52144093

Start: 1238707

End: 1239900

Strand: Direct

Name: trpB [H]

Synonym: BCZK1135

Alternate gene names: 52144093

Gene position: 1238707-1239900 (Clockwise)

Preceding gene: 52144094

Following gene: 52144092

Centisome position: 23.37

GC content: 41.54

Gene sequence:

>1194_bases
ATGAACTACGCATATCCAGATGAAAAAGGTCACTACGGTATATACGGAGGACGATACGTTCCAGAAACGTTAATGCAATC
TGTATTAGAACTAGAAGAAGCATATAAAGAGGCGATGGAAGATGAAGCATTTCAAAAGGAATTAAATCATTATTTAAAAA
CGTATGTCGGAAGAGAAACACCGCTTTATTTCGCTGAGAATATGACGGAGTATTGCGGAGGTGCAAAGATTTATTTAAAA
CGTGAAGATTTGAACCATACAGGAGCTCATAAAATTAATAATACAATTGGTCAGGCACTTCTTGCGGTGCGAATGGGCAA
GAAAAAAGTTGTCGCTGAAACAGGAGCTGGACAACACGGAGTCGCAACAGCTACGGTATGTGCCCTTCTCGGTTTAGAAT
GCGTCATTTTTATGGGAGAAGAAGATGTAAGACGTCAAAAATTAAATGTGTTCCGAATGGAATTACTCGGAGCGAAAGTA
GAAAGTGTAGCGGCAGGTAGCGGCACATTAAAAGATGCGGTAAACGAGGCGCTTCGTTACTGGGTTTCACATGTGCATGA
TACGCACTACATTATGGGATCTGTTCTCGGACCGCATCCATTCCCGCAAATTGTTCGTGATTTCCAAAGTGTAATTGGAA
AAGAAACGAAAAAACAATATGAAGCGTTAGAAGGAAAGTTACCAGAAGCAGTCGTTGCTTGCATTGGTGGTGGGAGTAAT
GCGATGGGAATGTTTTATCCATTCGTACACGATGAAGAAGTTGCTCTTTACGGCGTAGAAGCAGCTGGAAAAGGTGTTCA
TACAGAAAAGCATGCAGCAACTTTAACGAAAGGAAGCGTCGGCGTTTTACACGGATCGATGATGTATCTTCTGCAAAATG
AAGAAGGACAAATTCAAGAAGCGCACTCTATTTCAGCAGGACTTGATTACCCAGGTGTTGGTCCAGAACATAGCTTGCTA
AAAGATATTGGCCGCGTTTCTTATCATTCCATTACTGATGATGAGGCGTTAGAAGCGTTTCAGTTATTAACGAAAAAAGA
AGGGATTATCCCGGCGTTAGAAAGCTCGCATGCTGTCGCATACGCATTGAAATTAGCGCCGAAAATGAAGGAAGATGAAG
GACTTGTCATTTGTTTATCCGGCCGTGGTGATAAAGATGTAGAGAGTATAAAACGTTATATGGAAGAGGTGTAA

Upstream 100 bases:

>100_bases
GGCCATATATGGTTGATGTGAGCAGCGGAGTAGAGACAGAAGGAAAGAAAGATGTAGAGAAAATAAAACAATTTATTATA
AAAGCGAAGGAGTGTTCTAA

Downstream 100 bases:

>100_bases
AAAATGGGGGTAGAAAGAATTCAAGCAGCATTTGAAAATGGTAAGAAAGCATTTATTCCGTACGTAATGGGCGGAGATGG
TGGCCTTGAAATATTAAAAG

Product: tryptophan synthase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNYAYPDEKGHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYCGGAKIYLK
REDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKV
ESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSN
AMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLL
KDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRYMEEV

Sequences:

>Translated_397_residues
MNYAYPDEKGHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYCGGAKIYLK
REDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKV
ESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSN
AMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLL
KDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRYMEEV
>Mature_397_residues
MNYAYPDEKGHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYCGGAKIYLK
REDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKV
ESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSN
AMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLL
KDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRYMEEV

Specific function: The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine [H]

COG id: COG0133

COG function: function code E; Tryptophan synthase beta chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpB family [H]

Homologues:

Organism=Escherichia coli, GI1787515, Length=381, Percent_Identity=55.1181102362205, Blast_Score=422, Evalue=1e-119,
Organism=Saccharomyces cerevisiae, GI6321412, Length=388, Percent_Identity=58.2474226804124, Blast_Score=476, Evalue=1e-135,

Paralogues:

None

Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001926
- InterPro:   IPR006653
- InterPro:   IPR006654
- InterPro:   IPR023026 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.2.1.20 [H]

Molecular weight: Translated: 43604; Mature: 43604

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00168 TRP_SYNTHASE_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYAYPDEKGHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRET
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLYFAENMTEYCGGAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHG
CHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCC
VATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKVESVAAGSGTLKDAVNEALRY
HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSN
HHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
AMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQE
CCCEEECCCCCCCEEEEEEHHCCCCCCCHHHHHHHCCCCHHHHHHHEEEEEECCCCCHHH
AHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
YALKLAPKMKEDEGLVICLSGRGDKDVESIKRYMEEV
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MNYAYPDEKGHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRET
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLYFAENMTEYCGGAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHG
CHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCC
VATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKVESVAAGSGTLKDAVNEALRY
HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSN
HHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
AMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQE
CCCEEECCCCCCCEEEEEEHHCCCCCCCHHHHHHHCCCCHHHHHHHEEEEEECCCCCHHH
AHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
YALKLAPKMKEDEGLVICLSGRGDKDVESIKRYMEEV
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA