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The map label for this gene is yhfW [H]

Identifier: 52144018

GI number: 52144018

Start: 1310824

End: 1312017

Strand: Direct

Name: yhfW [H]

Synonym: BCZK1211

Alternate gene names: 52144018

Gene position: 1310824-1312017 (Clockwise)

Preceding gene: 52144019

Following gene: 52144017

Centisome position: 24.73

GC content: 34.76

Gene sequence:

>1194_bases
ATGAAGCTTATGACTGGTAAGTTGTTTTGGGATACGGGAGCTTCTATACCTTGTTATCCATCGTTAGAAAATGATATGAT
ATGTGATGTGCTCGTAGTTGGAAGCGGCGAAGCAGGTGCTCATATAGCGTATTCGTTAGCGAAAATTGGAATGCGCGTTA
TACTTATTGAAAAAAATATGATTTCGTGTGGTAGCACAGCTGCTAATACAGGGTTATTACAATTTCTTCATGATAAATCG
TTAACCTCACTTATCCATACATTTGGTGAAGAAAAAGGGGTACGAGCATATAAGCTTTGTTACAAAGCGTTACGAACAAT
GGAGAAAGTTGTACCGACTCTCGATATCGATCCCCAGTTTATTCCGCGAAATAGTTTATATTATGCAAGTAAAAGTGAAG
ACGTCTCATTTTTACAAGAGGAATACAAAATGCTACAGAATTATGGTTTTCCGGTTGAGTATTTTACAGAATCTGATATT
AAGGAACGTTATCCTTTTACAAAACAAGCGGCATTATATACACACGGTGATGCTGAGGTAAATCCGTATTTATTAGCACA
TGGTCTTTTGCATAAAGCAAACCAAATGGGAGCCACTATATATGAACATACAGAGGCAATACATATAAAAAAATACCAAA
ATGATTTAATTTGTTACACGAAAACAGGAAATCAAATTGCAGCAAAGAATATTATTATGGCGACAGGTTATGAAGCGCTT
TTTGGAAAGAAAGAAAAAAATGCAACAGTAGAAACTTCTTATGCAATTGTAACAAATGAAATAAATCAGTTTGAAGGTTG
GTATGAGCGATCATTAATTTGGGAAACAGCACGGCCGTATTTATATTTTCGAACGTATAAAAACCGTATTATTGTAGGCG
GATTAGATGAAGCAATGCAAATTCAAACAATCGGTGATACGAAATTATTGCATAAGCGTGACATCCTTATTAACATTGTA
AAAGAGATGTTCCCGCAGTATAAAACTATACAGGCAGACTACTATTGGGCAGCAGCATTTGGCAGTAGTCATGATGGTCT
TCCTATTTTAAAAGAAGACAAAAAGATACATAATTTATTTTACGCATTACCGCATGGAGGTAATGGAACTGTGTATGGAA
TGGTATTTGCAAAAATATTTGAGCAGTTATTTACAAATAAAGAAAGGGAAGATTTTTCTTTATTTAATCGATAG

Upstream 100 bases:

>100_bases
AAGTAAAAATAAAAAATCCAACTAGCCTATGTTAGTTGGATTTTTTTATGGAAAATAACAAAACATAGAAAGGAGAAATT
TATATTGTAGGAGTATAATT

Downstream 100 bases:

>100_bases
AAAAAAGGTAGCGAAGTGATGGAATGAGAGATATAAAAAAGTTTTTACAAAAATTACGTCCCGTACAACTTATTGTTTTA
TTTTATTTATTAGCAGTAGT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKLMTGKLFWDTGASIPCYPSLENDMICDVLVVGSGEAGAHIAYSLAKIGMRVILIEKNMISCGSTAANTGLLQFLHDKS
LTSLIHTFGEEKGVRAYKLCYKALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSFLQEEYKMLQNYGFPVEYFTESDI
KERYPFTKQAALYTHGDAEVNPYLLAHGLLHKANQMGATIYEHTEAIHIKKYQNDLICYTKTGNQIAAKNIIMATGYEAL
FGKKEKNATVETSYAIVTNEINQFEGWYERSLIWETARPYLYFRTYKNRIIVGGLDEAMQIQTIGDTKLLHKRDILINIV
KEMFPQYKTIQADYYWAAAFGSSHDGLPILKEDKKIHNLFYALPHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR

Sequences:

>Translated_397_residues
MKLMTGKLFWDTGASIPCYPSLENDMICDVLVVGSGEAGAHIAYSLAKIGMRVILIEKNMISCGSTAANTGLLQFLHDKS
LTSLIHTFGEEKGVRAYKLCYKALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSFLQEEYKMLQNYGFPVEYFTESDI
KERYPFTKQAALYTHGDAEVNPYLLAHGLLHKANQMGATIYEHTEAIHIKKYQNDLICYTKTGNQIAAKNIIMATGYEAL
FGKKEKNATVETSYAIVTNEINQFEGWYERSLIWETARPYLYFRTYKNRIIVGGLDEAMQIQTIGDTKLLHKRDILINIV
KEMFPQYKTIQADYYWAAAFGSSHDGLPILKEDKKIHNLFYALPHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
>Mature_397_residues
MKLMTGKLFWDTGASIPCYPSLENDMICDVLVVGSGEAGAHIAYSLAKIGMRVILIEKNMISCGSTAANTGLLQFLHDKS
LTSLIHTFGEEKGVRAYKLCYKALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSFLQEEYKMLQNYGFPVEYFTESDI
KERYPFTKQAALYTHGDAEVNPYLLAHGLLHKANQMGATIYEHTEAIHIKKYQNDLICYTKTGNQIAAKNIIMATGYEAL
FGKKEKNATVETSYAIVTNEINQFEGWYERSLIWETARPYLYFRTYKNRIIVGGLDEAMQIQTIGDTKLLHKRDILINIV
KEMFPQYKTIQADYYWAAAFGSSHDGLPILKEDKKIHNLFYALPHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=388, Percent_Identity=22.4226804123711, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI20130091, Length=221, Percent_Identity=22.6244343891403, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45306; Mature: 45306

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMTGKLFWDTGASIPCYPSLENDMICDVLVVGSGEAGAHIAYSLAKIGMRVILIEKNM
CCEEECEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCC
ISCGSTAANTGLLQFLHDKSLTSLIHTFGEEKGVRAYKLCYKALRTMEKVVPTLDIDPQF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IPRNSLYYASKSEDVSFLQEEYKMLQNYGFPVEYFTESDIKERYPFTKQAALYTHGDAEV
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCEEEEECCCCCC
NPYLLAHGLLHKANQMGATIYEHTEAIHIKKYQNDLICYTKTGNQIAAKNIIMATGYEAL
CHHHHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCEEEEEECCCEEECCEEEEECCCHHH
FGKKEKNATVETSYAIVTNEINQFEGWYERSLIWETARPYLYFRTYKNRIIVGGLDEAMQ
HCCCCCCCEEEEEEEEEECCHHHHCCHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCEE
IQTIGDTKLLHKRDILINIVKEMFPQYKTIQADYYWAAAFGSSHDGLPILKEDKKIHNLF
EEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEECCCCCCCCCCCCCCHHEEEEE
YALPHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MKLMTGKLFWDTGASIPCYPSLENDMICDVLVVGSGEAGAHIAYSLAKIGMRVILIEKNM
CCEEECEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCC
ISCGSTAANTGLLQFLHDKSLTSLIHTFGEEKGVRAYKLCYKALRTMEKVVPTLDIDPQF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IPRNSLYYASKSEDVSFLQEEYKMLQNYGFPVEYFTESDIKERYPFTKQAALYTHGDAEV
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCEEEEECCCCCC
NPYLLAHGLLHKANQMGATIYEHTEAIHIKKYQNDLICYTKTGNQIAAKNIIMATGYEAL
CHHHHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCEEEEEECCCEEECCEEEEECCCHHH
FGKKEKNATVETSYAIVTNEINQFEGWYERSLIWETARPYLYFRTYKNRIIVGGLDEAMQ
HCCCCCCCEEEEEEEEEECCHHHHCCHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCEE
IQTIGDTKLLHKRDILINIVKEMFPQYKTIQADYYWAAAFGSSHDGLPILKEDKKIHNLF
EEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEECCCCCCCCCCCCCCHHEEEEE
YALPHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]