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The map label for this gene is yebA [C]

Identifier: 52143916

GI number: 52143916

Start: 1406391

End: 1407662

Strand: Reverse

Name: yebA [C]

Synonym: BCZK1313

Alternate gene names: 52143916

Gene position: 1407662-1406391 (Counterclockwise)

Preceding gene: 52143907

Following gene: 52143929

Centisome position: 26.56

GC content: 35.61

Gene sequence:

>1272_bases
ATGAAAAAGAAATTTGCAGCGTTCAGCGTTTTAGCAGCAGGAACAATTTTTGTTTCTCCGTTACTATCACCTGCATACGC
TGAAACGAATCAAGATAAATTATCTAATATCCAATCTGAATTAGAAGGAAAACAAAATGACTTACAAAATAAATCAGCTG
AGAAAGAACAAATAGAAAAGGAAATTCAAGAATTACAAAAGAAAATCGACGATTTAACTACTTCTATTAATAAAAACGAG
GCTGAATTAAACGATACAAAAAAAGAAATTAGTAAAACACAACAAATAATCGCTGAAAAAAAGAAACATATAGAGCAATT
ACAAACAAACATAGATACACGTCAGGAAGTTATTAAGCAACGTTTGCAATCTATGCAAGAAAAACCTCGTACAAATATTA
TTACAGAGGTATTAACAACTTCTACAAACATCGCTGATCTTGTTGATAATATGTACTCTGTAAGTTTAATTTTAAACAAC
GATACCGATATCGTGAAAAAACAAACAACTGACCAAAATGCTGTAACGAAAGAAAAAGAGGCTGTTGAGAAAAAAGAGCA
AGAATTAAAAGAAGCTGAACAGAAATTAGTTCAAAAACAACAAGAGTTGCAAACGAATCAACAACAGCAGCAAACCTTTA
TTAGCGATCTACATACGAAAGTAGCAAAAGTAGATTCAGAGATTGAAGGATTAGAAGAATCTAAAGGTATTTTAGAAAAT
CAGCGTCAAGCTGTTCAAAAAGCAATTGAAGAAGAAAAACGCGCAGAAGAAGCTCGTAAAGCTGAAGAAGCACGTAAAGC
TGAAGAGGCTCGCAAACAAGCTACTACATCTGCTCAAAAAGCTCAAGCAGCTCCAACACCACACGATACAAATATTGGCG
GCTTTATTAAACCAGCAGCCGGATCAAAAACTTCTGGGTTTGGCGTGCGTTCTATAGATAACCATAAAGGAATCGATATC
GCAGCTTCAGGAACCGTTCCGATTATTGCCGCTGCTGATGGTGTTGTTATTCGCTCAGAATTATCTTCTAGTTATGGAAA
TGTTGTGTACTTATCTCACCGTATTAACGGAAAAACATACACAACAGTATATGCTCATATGAGTAGCCGTTCTGTATCAA
ATGGACAAACTGTAAAACAAGGAACACAACTTGGATTTATGGGGAACACTGGTCAATCATACGGACAGCATTTACACTTC
GAACTTCATCTTGGAGAATGGAACGTCGGCAAGACAAACGCAGTTGATCCATCTCCTTATATCGGATTATAG

Upstream 100 bases:

>100_bases
CTTAGCAATTTTATAAAAATTTCTTTACATTATGGTTACAACGATAGACACTCTTCTTCTTATGATATATAACATTCATA
GGGAAAGGAGCTAGACAACC

Downstream 100 bases:

>100_bases
AAAAAACTCGGTGCATACCGAGTTTTTTTATTTCCACTTCACACACTATAGGCATTCCACATAGACTATAACTAACCGCC
TATATTTTACTTGGTGAATT

Product: cell wall endopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQIIAEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNN
DTDIVKKQTTDQNAVTKEKEAVEKKEQELKEAEQKLVQKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDI
AASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHF
ELHLGEWNVGKTNAVDPSPYIGL

Sequences:

>Translated_423_residues
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQIIAEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNN
DTDIVKKQTTDQNAVTKEKEAVEKKEQELKEAEQKLVQKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDI
AASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHF
ELHLGEWNVGKTNAVDPSPYIGL
>Mature_423_residues
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQIIAEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNN
DTDIVKKQTTDQNAVTKEKEAVEKKEQELKEAEQKLVQKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDI
AASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHF
ELHLGEWNVGKTNAVDPSPYIGL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=90, Percent_Identity=37.7777777777778, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87082297, Length=452, Percent_Identity=21.0176991150442, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46901; Mature: 46901

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]