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The map label for this gene is 52143823

Identifier: 52143823

GI number: 52143823

Start: 1495858

End: 1496544

Strand: Direct

Name: 52143823

Synonym: BCZK1408

Alternate gene names: NA

Gene position: 1495858-1496544 (Clockwise)

Preceding gene: 52143822

Following gene: 52143821

Centisome position: 28.22

GC content: 28.38

Gene sequence:

>687_bases
ATGAAGAAAAATAAGAGTGGTACAAAAATATTGGATCGATTGATTACGATAGTTGTTTCATATAGCATAGCATTTTCTAT
ATTTGCACTCGTAACAACGGCGGTTGTATACGGAAAATGGCTATATTATTTTGAAATTGATTTTTTAAACATTCCAGATT
TAGCAGATATGACAAAGGATGATATTAAAAGAAATTATGATGTGCTTATCACATATTTATCTCCGTTTTATAATGGAGCA
TTACAGTTTCCCACATTAGATATGTCTACAAATGGCCGTATTCATTTTGTAGATGTTAAAAATATTTTAGTAAAGATTCA
ATATGTAATGTATGCGACAATTATGATTGCAATGATAGGCGGCATGTATTTGTTAAAAAAGAAAAATGAAAAGTTTTTAC
TACATGGATCTATTTTAACAATCATTTTTCCGATAGCGTTAATGTTACCGATTGCTATTAATTTTGAAAAGAGTTTTGTG
ATATTCCATAAGCTTTTATTCAGTAATGATTATTGGGTTTTTGATCCTGAGAAGGATCCGATTATATTAATGTTACCAGA
AGAATTCTTTATGCATGCTGCGTGTGCTATTTTATTATTCATTTTATTCGGTAGCATACTTTGTTACAGTTTGTATAGAT
ACTTTTTAAAAAAGAAAAGGATGTCAAATAAAAAATTCTCTGCTTAA

Upstream 100 bases:

>100_bases
TGGCTAAGTATTGCTGTGCTATGTATTACATATTATTATTGCTTACGCGAGAATCGAAAACAGTTTTCTTTATGATAGTT
AGAATATGTAGGGGGAGAAA

Downstream 100 bases:

>100_bases
AGAGAATTTTTTTGTTTGTAAAACGATAATATATTTTTCGGTCCAGTTCTGTTCTATTCTTGTCCACATTAACATATTTT
GTACTAGTAGTTATAGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein TIGR; Rhodopsin-Like GPCR Superfamily Membrane Protein; Membrane Spanning Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKNKSGTKILDRLITIVVSYSIAFSIFALVTTAVVYGKWLYYFEIDFLNIPDLADMTKDDIKRNYDVLITYLSPFYNGA
LQFPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAMIGGMYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFV
IFHKLLFSNDYWVFDPEKDPIILMLPEEFFMHAACAILLFILFGSILCYSLYRYFLKKKRMSNKKFSA

Sequences:

>Translated_228_residues
MKKNKSGTKILDRLITIVVSYSIAFSIFALVTTAVVYGKWLYYFEIDFLNIPDLADMTKDDIKRNYDVLITYLSPFYNGA
LQFPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAMIGGMYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFV
IFHKLLFSNDYWVFDPEKDPIILMLPEEFFMHAACAILLFILFGSILCYSLYRYFLKKKRMSNKKFSA
>Mature_228_residues
MKKNKSGTKILDRLITIVVSYSIAFSIFALVTTAVVYGKWLYYFEIDFLNIPDLADMTKDDIKRNYDVLITYLSPFYNGA
LQFPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAMIGGMYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFV
IFHKLLFSNDYWVFDPEKDPIILMLPEEFFMHAACAILLFILFGSILCYSLYRYFLKKKRMSNKKFSA

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26556; Mature: 26556

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKSGTKILDRLITIVVSYSIAFSIFALVTTAVVYGKWLYYFEIDFLNIPDLADMTKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCHHHCCHH
DIKRNYDVLITYLSPFYNGALQFPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAMIG
HHHCCHHHEEEEHHHHHCCCEECCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC
GMYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFVIFHKLLFSNDYWVFDPEKDP
CHHEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCC
IILMLPEEFFMHAACAILLFILFGSILCYSLYRYFLKKKRMSNKKFSA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKNKSGTKILDRLITIVVSYSIAFSIFALVTTAVVYGKWLYYFEIDFLNIPDLADMTKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCHHHCCHH
DIKRNYDVLITYLSPFYNGALQFPTLDMSTNGRIHFVDVKNILVKIQYVMYATIMIAMIG
HHHCCHHHEEEEHHHHHCCCEECCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC
GMYLLKKKNEKFLLHGSILTIIFPIALMLPIAINFEKSFVIFHKLLFSNDYWVFDPEKDP
CHHEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCC
IILMLPEEFFMHAACAILLFILFGSILCYSLYRYFLKKKRMSNKKFSA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA