Click here to switch to the map view.

The map label for this gene is flgD

Identifier: 52143705

GI number: 52143705

Start: 1615796

End: 1616368

Strand: Direct

Name: flgD

Synonym: BCZK1529

Alternate gene names: NA

Gene position: 1615796-1616368 (Clockwise)

Preceding gene: 52143707

Following gene: 52143704

Centisome position: 30.48

GC content: 38.22

Gene sequence:

>573_bases
GTGCCAACAGTTGGATTAAATACAACGAGTACAAATCATATTCCGTTACAAGCAGGAGCACAAACAAAAAATGCATCTGT
TACTGGTGCACAGTCGACAGCTCAACAAGCAAACGGAGTATCAGCAAGTACTCAAAAAACACCCGGTATTATGGATAAAG
ATGATTTCCTGAAACTTTTCTTAGCAAGCTTTCAACATCAAGACCCGTTTAATGCGATGGATATGAACCAAATGATGAAC
CAAACAGCACAGCTATCGCTTATGGAGCAAGTACAGAATATGACGAAAGCAGTAGATAAACTGCAATCAACGATGTATTC
GACGGCTCTTGATGGAGGGATGAAGTTTTTAGGAAAGTACGTTAGAGGTGTAAGCAATAATGGAAAGCAAGTGACTGGTC
AAGTGGAAACAGTTCGACTTGCTGAAAATAACGATGTGCAACTTATTGTTGATAATCAAGTTGTCTCACTTCGTTTCATA
GAAAGGGTTTCTGATAAACCGATAACAGAAACTAATCCGGAAGATGAGAAGAAAGATGATATAGAAAAAAATGAAGAGGT
TAAGCCAAATTAA

Upstream 100 bases:

>100_bases
GCAGCGAGAACAAGAGCAAAGACAAAAACAAAAATTAGCAAGTACGAAACGTGAGAAACAAGAATCAAAAGAATTTGCGG
GATTATTGGAGGAATAAAGC

Downstream 100 bases:

>100_bases
TAAAAGGAGTGTACAAAGGTTATGATTAAAGCGTTATATACAAGTATTACAGGGATGAATGCAGCACAAAATGCATTAAG
TGTTACTTCAAATAATATTG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Basal Body Rod Protein; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPTVGLNTTSTNHIPLQAGAQTKNASVTGAQSTAQQANGVSASTQKTPGIMDKDDFLKLFLASFQHQDPFNAMDMNQMMN
QTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKYVRGVSNNGKQVTGQVETVRLAENNDVQLIVDNQVVSLRFI
ERVSDKPITETNPEDEKKDDIEKNEEVKPN

Sequences:

>Translated_190_residues
MPTVGLNTTSTNHIPLQAGAQTKNASVTGAQSTAQQANGVSASTQKTPGIMDKDDFLKLFLASFQHQDPFNAMDMNQMMN
QTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKYVRGVSNNGKQVTGQVETVRLAENNDVQLIVDNQVVSLRFI
ERVSDKPITETNPEDEKKDDIEKNEEVKPN
>Mature_189_residues
PTVGLNTTSTNHIPLQAGAQTKNASVTGAQSTAQQANGVSASTQKTPGIMDKDDFLKLFLASFQHQDPFNAMDMNQMMNQ
TAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKYVRGVSNNGKQVTGQVETVRLAENNDVQLIVDNQVVSLRFIE
RVSDKPITETNPEDEKKDDIEKNEEVKPN

Specific function: Unknown

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20884; Mature: 20753

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVGLNTTSTNHIPLQAGAQTKNASVTGAQSTAQQANGVSASTQKTPGIMDKDDFLKLF
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LASFQHQDPFNAMDMNQMMNQTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKY
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGVSNNGKQVTGQVETVRLAENNDVQLIVDNQVVSLRFIERVSDKPITETNPEDEKKDD
HHCCCCCCCEEECCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IEKNEEVKPN
HCCCCCCCCC
>Mature Secondary Structure 
PTVGLNTTSTNHIPLQAGAQTKNASVTGAQSTAQQANGVSASTQKTPGIMDKDDFLKLF
CCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LASFQHQDPFNAMDMNQMMNQTAQLSLMEQVQNMTKAVDKLQSTMYSTALDGGMKFLGKY
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGVSNNGKQVTGQVETVRLAENNDVQLIVDNQVVSLRFIERVSDKPITETNPEDEKKDD
HHCCCCCCCEEECCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IEKNEEVKPN
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA