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The map label for this gene is fliN [C]

Identifier: 52143689

GI number: 52143689

Start: 1626310

End: 1626669

Strand: Direct

Name: fliN [C]

Synonym: BCZK1540

Alternate gene names: 52143689

Gene position: 1626310-1626669 (Clockwise)

Preceding gene: 52143697

Following gene: 52143690

Centisome position: 30.68

GC content: 38.33

Gene sequence:

>360_bases
ATGAAGCATGAAGTATCTCCTGTGTCATTAATGGGATTAGAAGATTTTGCAGGAAAGCGAAATGAAGCAAGTAAAGCACA
TATTGATACTGTTTCAGATATTTCGATTGAACTTGGTGTAAAGCTTGGAAAGGCATCTATTACGCTCGGTGACGTGAAGC
AATTAAAAGTTGGCGATGTTCTGGAAGTAGAGAAAAACTTAGGACATAAAGTAGATGTGTATTTAAGTAATATGAAAGTC
GGCATCGGGGAAGCGATCGTAATGGACGAGAAGTTCGGTATTATCATTTCTGAAATTGAAGCTGACAAGAAGCAAGCTGC
GCTTATGAAAGCGCAAAGTCAAATGCAAGATAAAGAGTAG

Upstream 100 bases:

>100_bases
GGTTATGTAGATGGAAAACATAAATTTAATTGTTTTATTGGAAAAGATGGAACGCGTAAGGCGCTCTTATTTAAAAGTTT
TGTAGAGTAGGAGGATCCAT

Downstream 100 bases:

>100_bases
AGGAGGAGTCATATGTCGTATATGACGACCTTATTTCAAGTCGTTTTACTGTTTGGTGCGCTCGGCTACGGTGCCTATTA
TATGACGAAAAAGACGCGCA

Product: flagellar motor switch protein

Products: NA

Alternate protein names: Flagellar Motor Switch Protein FliN; Flagellar Motor Switch Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Sequences:

>Translated_119_residues
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
>Mature_119_residues
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12938; Mature: 12938

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDV
CCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEECEEECCEEEEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHEVSPVSLMGLEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDV
CCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEECEEECCEEEEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA