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The map label for this gene is tetR [C]

Identifier: 52143678

GI number: 52143678

Start: 1637154

End: 1637738

Strand: Direct

Name: tetR [C]

Synonym: BCZK1553

Alternate gene names: 52143678

Gene position: 1637154-1637738 (Clockwise)

Preceding gene: 52143682

Following gene: 52143679

Centisome position: 30.88

GC content: 34.19

Gene sequence:

>585_bases
ATGGCAAAACCGAATGTTGTTAATAAAGAGAAGTTACTACAAGCAGCAAAAGAAATTATTGCAGAGCATGGGATGGAGAA
GTTGACATTAAAAGCAGTTGCAGAGAGTGCTCAAGTTACACAAGGTACCGTATATTATCATTTTAAAACGAAGGATCAAT
TATTACTTGAAGTAACCGAAGCGTTTTGTAAAGCGTCGTGGGAAAAAATAGGAAAGGATGTACAGTTAGAAAAGGCTTTA
CAGTCTGCCGAAAGTAGATGTGTGAAAGATTCAATGTATCATCATTTGTTTTTTCAATTAGTAGCTAGTGGATTACAAAA
TGATGCGATGAAAGATAAAATTGGTGGATTGTTACATTATGAAAACCAACAATTAACAAGAGTGTTAAATAAAAATATAG
GAGGTACAATGACATCTCAAATTTCAACTGAAACGTGGAGCGTTTTATGTAATGCATTAATTGATGGATTGGCATTGCAA
GCCTTATTCAATCCATCTTTTTCTAGCGACAAAGTATATGGTGATTTGCACCTGTTATTGGAAAAGTTCATAGAGCTACA
AAAGGGAGGTAATGGTAGTGAATAA

Upstream 100 bases:

>100_bases
GAAGAAAAGTTGAATGTTGGCTTTTCTTCCTTTTTATTTATTTGATTTTTCTGTATAATTTAAGTTAGTTATCTAACTAA
CTTAAAAGGGGGGCATAGAA

Downstream 100 bases:

>100_bases
TAAACTTTGGCTCACTATTTTATTTTCTATCGGCGTTTGGTTTTTTGCCTCAGCGTTCTTCATTATTTTCGGTTCTTCTG
TTTTATTAGAATACACTTCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAKPNVVNKEKLLQAAKEIIAEHGMEKLTLKAVAESAQVTQGTVYYHFKTKDQLLLEVTEAFCKASWEKIGKDVQLEKAL
QSAESRCVKDSMYHHLFFQLVASGLQNDAMKDKIGGLLHYENQQLTRVLNKNIGGTMTSQISTETWSVLCNALIDGLALQ
ALFNPSFSSDKVYGDLHLLLEKFIELQKGGNGSE

Sequences:

>Translated_194_residues
MAKPNVVNKEKLLQAAKEIIAEHGMEKLTLKAVAESAQVTQGTVYYHFKTKDQLLLEVTEAFCKASWEKIGKDVQLEKAL
QSAESRCVKDSMYHHLFFQLVASGLQNDAMKDKIGGLLHYENQQLTRVLNKNIGGTMTSQISTETWSVLCNALIDGLALQ
ALFNPSFSSDKVYGDLHLLLEKFIELQKGGNGSE
>Mature_193_residues
AKPNVVNKEKLLQAAKEIIAEHGMEKLTLKAVAESAQVTQGTVYYHFKTKDQLLLEVTEAFCKASWEKIGKDVQLEKALQ
SAESRCVKDSMYHHLFFQLVASGLQNDAMKDKIGGLLHYENQQLTRVLNKNIGGTMTSQISTETWSVLCNALIDGLALQA
LFNPSFSSDKVYGDLHLLLEKFIELQKGGNGSE

Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21576; Mature: 21445

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPNVVNKEKLLQAAKEIIAEHGMEKLTLKAVAESAQVTQGTVYYHFKTKDQLLLEVTE
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
AFCKASWEKIGKDVQLEKALQSAESRCVKDSMYHHLFFQLVASGLQNDAMKDKIGGLLHY
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
ENQQLTRVLNKNIGGTMTSQISTETWSVLCNALIDGLALQALFNPSFSSDKVYGDLHLLL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EKFIELQKGGNGSE
HHHHHHHCCCCCCC
>Mature Secondary Structure 
AKPNVVNKEKLLQAAKEIIAEHGMEKLTLKAVAESAQVTQGTVYYHFKTKDQLLLEVTE
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
AFCKASWEKIGKDVQLEKALQSAESRCVKDSMYHHLFFQLVASGLQNDAMKDKIGGLLHY
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
ENQQLTRVLNKNIGGTMTSQISTETWSVLCNALIDGLALQALFNPSFSSDKVYGDLHLLL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EKFIELQKGGNGSE
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA