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The map label for this gene is yxkF [H]

Identifier: 52143601

GI number: 52143601

Start: 1720204

End: 1721067

Strand: Reverse

Name: yxkF [H]

Synonym: BCZK1633

Alternate gene names: 52143601

Gene position: 1721067-1720204 (Counterclockwise)

Preceding gene: 52143586

Following gene: 52143603

Centisome position: 32.47

GC content: 31.13

Gene sequence:

>864_bases
ATGATTCAACAATTAAAAAAATATTACGCTAAAGATATAAAAATTAATGAAGCCATACTTTCTGAAGACTACAGTTGGTT
TTTGATTGACGGGAATAGAGTAGGAATTCGTAAATCTCGCTTACATAAACGGGAGTGTCAATTGCTTTCATCCCTCTTAA
CTCCCATCCATACTGACACATGCTACGAAACAAAAATAGAAAAGTATTGGTACGAAGCGTTATATCAGAGTAAAGATATT
CAAATAACATCTGTACGCTTTTTACATTTCTTCACAACGCATCCTATAACGGAACGAGAAGAATTTCATAATGCTTTACA
TTCAATACTTGGTTTTGATACTCCTACAATATGGGAAACTTCACAAACTGGAGTCCTCATCTTAACAGAAAATATATCTG
AATATAGATTGCAAACAGCCCTTGATACGCTAGAAACAGATTTTTTTATATCCTTATCCTTTTTTGTCGGCAGACACTAC
ACCCAAACCAATCAAGTTTCTCACTTGTATCAATGGGAACGAAATTTATTTTCTTATCTTTCTCCCTATTTATCAAAGAA
AATTACATACATTGAACAACTTCTCCCTTATCAATTAATGACCTTATTACCAAAAGAAAAGAGAGAAAAATATACAAATC
GTTTATTAGAAAATGTTTCCAATGATAAAGAACTAATAGAGAGTATTAAAGTATTCTTCCAATGTAATTTAAATGTATCA
CTTGCGGCTAAACAATTATATTTACACCGAAATACTTTACAGTATCGAATTGACAAATTTATTGAAAAAACAGGATTGAA
TATAAAAACATTTGAAGGTGCTGTGGCTGTTTATTTGGCTTTTCTTTCTTTGAACATCTCGTAA

Upstream 100 bases:

>100_bases
TATTTTCTGAATTTTTTAAATTTTTATCGCGAACTATATTAATCCATTATCCCTATATAATTTGTTATTAATAAATAATA
TAAAGATAAGGAGTGTTGAT

Downstream 100 bases:

>100_bases
TTTTGCATAAAAAAATTAACTTTTTTTGTGCAACTTACCAATTCACCTTACACTAAATAAAACTTATAATTCAGTTAATT
ATAAAAATAGGGGTGATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIQQLKKYYAKDIKINEAILSEDYSWFLIDGNRVGIRKSRLHKRECQLLSSLLTPIHTDTCYETKIEKYWYEALYQSKDI
QITSVRFLHFFTTHPITEREEFHNALHSILGFDTPTIWETSQTGVLILTENISEYRLQTALDTLETDFFISLSFFVGRHY
TQTNQVSHLYQWERNLFSYLSPYLSKKITYIEQLLPYQLMTLLPKEKREKYTNRLLENVSNDKELIESIKVFFQCNLNVS
LAAKQLYLHRNTLQYRIDKFIEKTGLNIKTFEGAVAVYLAFLSLNIS

Sequences:

>Translated_287_residues
MIQQLKKYYAKDIKINEAILSEDYSWFLIDGNRVGIRKSRLHKRECQLLSSLLTPIHTDTCYETKIEKYWYEALYQSKDI
QITSVRFLHFFTTHPITEREEFHNALHSILGFDTPTIWETSQTGVLILTENISEYRLQTALDTLETDFFISLSFFVGRHY
TQTNQVSHLYQWERNLFSYLSPYLSKKITYIEQLLPYQLMTLLPKEKREKYTNRLLENVSNDKELIESIKVFFQCNLNVS
LAAKQLYLHRNTLQYRIDKFIEKTGLNIKTFEGAVAVYLAFLSLNIS
>Mature_287_residues
MIQQLKKYYAKDIKINEAILSEDYSWFLIDGNRVGIRKSRLHKRECQLLSSLLTPIHTDTCYETKIEKYWYEALYQSKDI
QITSVRFLHFFTTHPITEREEFHNALHSILGFDTPTIWETSQTGVLILTENISEYRLQTALDTLETDFFISLSFFVGRHY
TQTNQVSHLYQWERNLFSYLSPYLSKKITYIEQLLPYQLMTLLPKEKREKYTNRLLENVSNDKELIESIKVFFQCNLNVS
LAAKQLYLHRNTLQYRIDKFIEKTGLNIKTFEGAVAVYLAFLSLNIS

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34034; Mature: 34034

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQLKKYYAKDIKINEAILSEDYSWFLIDGNRVGIRKSRLHKRECQLLSSLLTPIHTDT
CHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCEECCHHHHHHHHHHHHHHHHHHHCCCCC
CYETKIEKYWYEALYQSKDIQITSVRFLHFFTTHPITEREEFHNALHSILGFDTPTIWET
HHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEC
SQTGVLILTENISEYRLQTALDTLETDFFISLSFFVGRHYTQTNQVSHLYQWERNLFSYL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SPYLSKKITYIEQLLPYQLMTLLPKEKREKYTNRLLENVSNDKELIESIKVFFQCNLNVS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
LAAKQLYLHRNTLQYRIDKFIEKTGLNIKTFEGAVAVYLAFLSLNIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQQLKKYYAKDIKINEAILSEDYSWFLIDGNRVGIRKSRLHKRECQLLSSLLTPIHTDT
CHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCEECCHHHHHHHHHHHHHHHHHHHCCCCC
CYETKIEKYWYEALYQSKDIQITSVRFLHFFTTHPITEREEFHNALHSILGFDTPTIWET
HHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEC
SQTGVLILTENISEYRLQTALDTLETDFFISLSFFVGRHYTQTNQVSHLYQWERNLFSYL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SPYLSKKITYIEQLLPYQLMTLLPKEKREKYTNRLLENVSNDKELIESIKVFFQCNLNVS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
LAAKQLYLHRNTLQYRIDKFIEKTGLNIKTFEGAVAVYLAFLSLNIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]