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The map label for this gene is ycjN [C]

Identifier: 52143600

GI number: 52143600

Start: 1721503

End: 1722753

Strand: Direct

Name: ycjN [C]

Synonym: BCZK1634

Alternate gene names: 52143600

Gene position: 1721503-1722753 (Clockwise)

Preceding gene: 52144775

Following gene: 52143598

Centisome position: 32.48

GC content: 34.37

Gene sequence:

>1251_bases
ATGAAAAAGTGGTTTATTTTCTTTTTGTCAACATTGCTATTGGCAATAGTAGGATGTTCTAACAGTGGCGAAAAAGTTAA
CACGTCATCTAAAGATGAAAAAATAGAATTACGGTATGCACTTTGGGATAAGAAACAACTACCAGCAGTGGAAAAAGTGG
TTCAACAGTTTAATGAAAAACATCCGAATATTAAGGTGAAAATAGAATTAACAGCGTACGGGCAGTATTTTCAGAAGCTT
GAAACGGCAGCAACAGGAAATGCGTTGCCGGATGTATTTTGGATGAATGGACCAAATGTTGTGAAATACGCTTCGGGGAA
AGTATTGATGCCCTTGGATGATAAAGCGAAAAAGGATAAGTATAAATTGGAAAATTATCCGAAATCTTTAGTTGATTTAT
ATACAGTAGATAATAAAACTTACGGTATTCCAAAAGATTTTGATACAACGGCACTTTGGTATAATAAAAAATTATTTGAT
GAAGCTGGAGTAGCATATCCAGATGATTCATGGGATTGGGAGAAAATGAAAGAAGCTGCAAAAAAATTGACGAAAAAGGA
AAAAGATGTTTGGGGATTTGCAGCAGCAATGGGAAATCAAGGTGGCTATTATGATCTCATTTACCAAAATAAAGGGTATG
TTCTTTCTAAAGATAAAAAAACAGTAGGATTTAATAAACCACAAGCAATTGAAGCGTTTAATTATAACATTAGTTTTATT
AAAGAAGGATTATCACCAACATTTGCTCAAATGACAGAGACAACAGCATCTGATTTGTTTTTATCAGGTAAAGTAGCGAT
GATTTTTGATGGGCCTTGGATGGTACCAGAATATAAGAAAAATCCTGATTTAAATATTGCTGTTATGCCAAAAGGGAAAG
AAAGAGCTGTTATGATTCATGGTCTAGCAAATGTCATCTCAGCGAAAACAAAATATCCGGATGCAGCTTGGGAATTTGTG
AAATATTTAGGTTCTAAAGAGGCAGCAGATGTGTTTGCAGAAACTGGAACAGTTATTCCTGCTTTTAATGGAACACAAGA
AGCATGGGTTAAATCCGTTCCAAACTTGAATTTACAAGCGTATATCACTGGTCTTGAATATTCTTACCCATTACCGAGTG
TGAAAAATACAGGAGCTTTATGGGAGCAAGAAACAAAAGTATTAAAAAGGGTATGGGGAGGAGAATTGAATGTTGAAGAT
GCAACAAAAGAATTAACAGAGAAGGCAAATGAAGTTCTTTCTAAAAAATAA

Upstream 100 bases:

>100_bases
TAAAGTTGATTATATTAGTTTAATTTGTCGTCAGTGAATTACAAGAAACATAAGTAAAGATTATGTTATATAGATGATTG
TTTCTAGAGGAGGAAAAGGG

Downstream 100 bases:

>100_bases
GGAGAGGGATCCTCTCCTTACTTTAAATCAAAAATTATGGGAGGAGTGAAGAGATGGAGGATCTATCAATAAAGGTAGTG
GAGCAAAAAAACACACATAT

Product: sugar ABC transporter, sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKKWFIFFLSTLLLAIVGCSNSGEKVNTSSKDEKIELRYALWDKKQLPAVEKVVQQFNEKHPNIKVKIELTAYGQYFQKL
ETAATGNALPDVFWMNGPNVVKYASGKVLMPLDDKAKKDKYKLENYPKSLVDLYTVDNKTYGIPKDFDTTALWYNKKLFD
EAGVAYPDDSWDWEKMKEAAKKLTKKEKDVWGFAAAMGNQGGYYDLIYQNKGYVLSKDKKTVGFNKPQAIEAFNYNISFI
KEGLSPTFAQMTETTASDLFLSGKVAMIFDGPWMVPEYKKNPDLNIAVMPKGKERAVMIHGLANVISAKTKYPDAAWEFV
KYLGSKEAADVFAETGTVIPAFNGTQEAWVKSVPNLNLQAYITGLEYSYPLPSVKNTGALWEQETKVLKRVWGGELNVED
ATKELTEKANEVLSKK

Sequences:

>Translated_416_residues
MKKWFIFFLSTLLLAIVGCSNSGEKVNTSSKDEKIELRYALWDKKQLPAVEKVVQQFNEKHPNIKVKIELTAYGQYFQKL
ETAATGNALPDVFWMNGPNVVKYASGKVLMPLDDKAKKDKYKLENYPKSLVDLYTVDNKTYGIPKDFDTTALWYNKKLFD
EAGVAYPDDSWDWEKMKEAAKKLTKKEKDVWGFAAAMGNQGGYYDLIYQNKGYVLSKDKKTVGFNKPQAIEAFNYNISFI
KEGLSPTFAQMTETTASDLFLSGKVAMIFDGPWMVPEYKKNPDLNIAVMPKGKERAVMIHGLANVISAKTKYPDAAWEFV
KYLGSKEAADVFAETGTVIPAFNGTQEAWVKSVPNLNLQAYITGLEYSYPLPSVKNTGALWEQETKVLKRVWGGELNVED
ATKELTEKANEVLSKK
>Mature_416_residues
MKKWFIFFLSTLLLAIVGCSNSGEKVNTSSKDEKIELRYALWDKKQLPAVEKVVQQFNEKHPNIKVKIELTAYGQYFQKL
ETAATGNALPDVFWMNGPNVVKYASGKVLMPLDDKAKKDKYKLENYPKSLVDLYTVDNKTYGIPKDFDTTALWYNKKLFD
EAGVAYPDDSWDWEKMKEAAKKLTKKEKDVWGFAAAMGNQGGYYDLIYQNKGYVLSKDKKTVGFNKPQAIEAFNYNISFI
KEGLSPTFAQMTETTASDLFLSGKVAMIFDGPWMVPEYKKNPDLNIAVMPKGKERAVMIHGLANVISAKTKYPDAAWEFV
KYLGSKEAADVFAETGTVIPAFNGTQEAWVKSVPNLNLQAYITGLEYSYPLPSVKNTGALWEQETKVLKRVWGGELNVED
ATKELTEKANEVLSKK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46959; Mature: 46959

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWFIFFLSTLLLAIVGCSNSGEKVNTSSKDEKIELRYALWDKKQLPAVEKVVQQFNEK
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHC
HPNIKVKIELTAYGQYFQKLETAATGNALPDVFWMNGPNVVKYASGKVLMPLDDKAKKDK
CCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCEEECCCCCCCCCH
YKLENYPKSLVDLYTVDNKTYGIPKDFDTTALWYNKKLFDEAGVAYPDDSWDWEKMKEAA
HHHHHCCHHHHEEEEECCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHH
KKLTKKEKDVWGFAAAMGNQGGYYDLIYQNKGYVLSKDKKTVGFNKPQAIEAFNYNISFI
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCHHHH
KEGLSPTFAQMTETTASDLFLSGKVAMIFDGPWMVPEYKKNPDLNIAVMPKGKERAVMIH
HHCCCHHHHHHHHHHHHHEEECCCEEEEECCCEECCCCCCCCCCEEEEECCCCCCEEEEE
GLANVISAKTKYPDAAWEFVKYLGSKEAADVFAETGTVIPAFNGTQEAWVKSVPNLNLQA
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCEEE
YITGLEYSYPLPSVKNTGALWEQETKVLKRVWGGELNVEDATKELTEKANEVLSKK
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKWFIFFLSTLLLAIVGCSNSGEKVNTSSKDEKIELRYALWDKKQLPAVEKVVQQFNEK
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHC
HPNIKVKIELTAYGQYFQKLETAATGNALPDVFWMNGPNVVKYASGKVLMPLDDKAKKDK
CCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCEEECCCCCCCCCH
YKLENYPKSLVDLYTVDNKTYGIPKDFDTTALWYNKKLFDEAGVAYPDDSWDWEKMKEAA
HHHHHCCHHHHEEEEECCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHH
KKLTKKEKDVWGFAAAMGNQGGYYDLIYQNKGYVLSKDKKTVGFNKPQAIEAFNYNISFI
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCHHHH
KEGLSPTFAQMTETTASDLFLSGKVAMIFDGPWMVPEYKKNPDLNIAVMPKGKERAVMIH
HHCCCHHHHHHHHHHHHHEEECCCEEEEECCCEECCCCCCCCCCEEEEECCCCCCEEEEE
GLANVISAKTKYPDAAWEFVKYLGSKEAADVFAETGTVIPAFNGTQEAWVKSVPNLNLQA
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCEEE
YITGLEYSYPLPSVKNTGALWEQETKVLKRVWGGELNVEDATKELTEKANEVLSKK
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA