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The map label for this gene is oppA [H]

Identifier: 52143584

GI number: 52143584

Start: 1740528

End: 1742168

Strand: Reverse

Name: oppA [H]

Synonym: BCZK1651

Alternate gene names: 52143584

Gene position: 1742168-1740528 (Counterclockwise)

Preceding gene: 52143578

Following gene: 52143586

Centisome position: 32.87

GC content: 34.61

Gene sequence:

>1641_bases
ATGAAGAAAAAGACGCAAGGAATCGTTGCACTCTCAATCACATTATCTATGTTTTTAACAGCATGTGGTCAAAAACAAGA
GGCAACAACTACCGGAGAAACGAAAAAAGAATCTTCAAAACAAGTATTAAACATTGTAGAAGCTGGGGAAATTTCTACAC
TTGATTCATCTATCGCAACCGATGGGTTTTCTTACGCTGCATTAAACAACGTAATGGAAGGATTATATATGCCTGGTCCT
GACAATAAACCTGTTCCTGCAGCTGCTGAATCATACAAACTGAGCGAAGACGGAAAAACATATACATTTACATTACACGA
TTCAAAATGGTCAAATGGCGATCCAGTAACTGCTCATGATTTTGAATATGCATGGAAACGTGCCGTAAATCCAGAAACTG
CTTCTGAATACGCACATATTATGTTCGATATTAAAAACGCAGAAAAAATAAATAAAAAAGAATTGCCAATTGACTCATTT
GGTGTAAAAGCAATTGACGATAAAACATTAGAAGTACAGTTAGAACACCCTGTTCCATACTTTTTAGGTTTAATGGGATT
TGCAACATTTTATCCTCAAAACAAAAAGGTTGTAGACGCACAAGGGAAAAATTACGGACTTGAAGCTGCAAATGTAGTTT
ATAACGGACCTTTCCAATTAAGTGAATGGAAACATGATACAAGTTATAAAATGACAAAAAACCCGAACTACTGGGATAAT
AAAAATGTGAAATTAAATGAAATTAATGTAAATATCGTAAAAGATACTTCAACAGCTGTTAATTTATTTGAAAGTAAACA
AGTAGACCGAATTACGATTAATTCAGAGTTTGTTGATAAATATCAAAAAGATCCGAGCTTAAAGAAGATGGAACGTCCTT
CTGTGACGTTTTTCCGATTTAGTCAAAAGAACCCTTTATTAGCAAACAAAAATGCTCGTAAAGCTATTTCGCTTGCTTTT
GATAAACAAGGAATCGCAACAACGATTTTAAACAATGGTTCTATACCTGCGAATGCATTCGTTCCAAAAGGATTCGTAAA
AGGACCTGACAATAAAGATTTTCGCAGTACAAGTCATGTAAAAGTAGAAACAAATGTGAAAGAAGCTAAAACACTATGGG
AAACTGCGAAAAAAGAAACAAACTTACAAAACGCTTCTCTTTCAATCATAACAACAGATGAGTCTAACGATAAAAAAATT
AGTGAGTTTTTAAAAGGTGAACTGGAGAAAAACTTACCTGGATTAAAAATCACATTACAACCACTTCCAGTAAAAGCATT
TTTAGATCGTGAAGGAAATGGCGATTTTGAAATCTCACTTTCTACTTGGGGACCAGATTATCCTGATCCTACAACATTTT
TAAATATGTTCGTCACAGACGGACCGTTTAATAAGATGAGTTACTCAAACAAACAATACGACGAATTAATTGAGAAAACG
AGCTCTACTTTAGTAACTGACTTACCAGCACGTTGGAAAGCGTTCCAAGATGCCGAGAAAATCTTACTTGAAGATGATGC
AGCTATCGCTCCCATCTTCCAATCAGGACTTGTATATTTAGAACGTCCAACAGTAAAAGGTGTTGTTGTTCGTCCATTTG
CAGGAATTTATTCTTATAAATGGGCCTCTATTACAGAATAA

Upstream 100 bases:

>100_bases
ACATAAGATATTTTTTCTATATGCTTTATCGGATTTATTTATAGAAATTTTCTATATTTTCTTTTATACTAAGGCAGAGA
TGAAGGGAAGGATGACAACT

Downstream 100 bases:

>100_bases
GAATAAGGCGATCCTAAAACATTTTAGGATCGCCTTATTTCTTAAATTGCAAAACGCTTATATTTTTCGTAATCGCTCGT
CTTACATTCCACTTCTAGTT

Product: oligopeptide ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MKKKTQGIVALSITLSMFLTACGQKQEATTTGETKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDDKTLEVQLEHPVPYFLGLMGFATFYPQNKKVVDAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQPLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYKWASITE

Sequences:

>Translated_546_residues
MKKKTQGIVALSITLSMFLTACGQKQEATTTGETKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDDKTLEVQLEHPVPYFLGLMGFATFYPQNKKVVDAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQPLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYKWASITE
>Mature_546_residues
MKKKTQGIVALSITLSMFLTACGQKQEATTTGETKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDDKTLEVQLEHPVPYFLGLMGFATFYPQNKKVVDAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQPLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYKWASITE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=499, Percent_Identity=29.0581162324649, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1787495, Length=520, Percent_Identity=28.8461538461538, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI87081878, Length=528, Percent_Identity=28.5984848484849, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1787762, Length=456, Percent_Identity=26.5350877192982, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1789966, Length=469, Percent_Identity=23.454157782516, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787052, Length=552, Percent_Identity=23.1884057971014, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787551, Length=530, Percent_Identity=21.5094339622642, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789887, Length=509, Percent_Identity=24.3614931237721, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61085; Mature: 61085

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTQGIVALSITLSMFLTACGQKQEATTTGETKKESSKQVLNIVEAGEISTLDSSIAT
CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHC
DGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCCCCCEECC
FEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDDKTLEVQLEHPVPY
HHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEEECCCCHH
FLGLMGFATFYPQNKKVVDAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
HHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCEECCCCCCCCCEEECCCCCCCCC
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRF
CCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCCCEEEEEE
SQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHV
CCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
KVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLPGLKITLQ
EEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
PLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
CCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYK
HCCEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEECCCCCHHEEC
WASITE
CEECCC
>Mature Secondary Structure
MKKKTQGIVALSITLSMFLTACGQKQEATTTGETKKESSKQVLNIVEAGEISTLDSSIAT
CCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHC
DGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCCCCCEECC
FEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDDKTLEVQLEHPVPY
HHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEEECCCCHH
FLGLMGFATFYPQNKKVVDAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
HHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCEECCCCCCCCCEEECCCCCCCCC
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRF
CCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCCCEEEEEE
SQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHV
CCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
KVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLPGLKITLQ
EEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
PLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
CCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
SSTLVTDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVVRPFAGIYSYK
HCCEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEECCCCCHHEEC
WASITE
CEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]