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The map label for this gene is ccdA

Identifier: 52143524

GI number: 52143524

Start: 1807953

End: 1808633

Strand: Reverse

Name: ccdA

Synonym: BCZK1710

Alternate gene names: NA

Gene position: 1808633-1807953 (Counterclockwise)

Preceding gene: 52143523

Following gene: 52143525

Centisome position: 34.12

GC content: 33.48

Gene sequence:

>681_bases
ATGTCTCCTTTAATAGATGTCGCGAATGCTACGAAATCAGTACCTCTTTTATTTGCATTTTTATTAGGCATTGTAGGTAC
ACTTGCTCCTTGCCAATTAACAGGAAACATTAGTGCTATTACACTTTATGGAAATCAATCTTTACAAAAGAGATATGCAT
GGAAGCATATACTGTTATTCATTTTAGGAAAAATAATAGCTTTTACTACACTTGGATTATTAGTATGGTTTTTAGGAAAA
GAGATTCAGCAAATATTGACTTTGTATTTCCCATGGTTACGAAAAATGATGGGACCTTTATTAGTTTTAATGGGGTTACT
GTTGTCAGGTATTATAAAAGGAAGATATTTCTTCTCGATCAAATTTATACGAAACCAAAATGAAGTTGGTTCATTTTTAC
TTGGATTCTTCTTTTCCTTAGCTTTCTGTCCGACTATGTTCGTTCTATTTTTTGGAACGTTAATCCCTTTATCCTTATCA
TATACGTACGGGTACTTGTTTCCGTCATTCTTTTCGGTAGGAACGGCTCTCCCTATCGTTATATTCATGTTTATCATCTC
CTATCTTGGATTAAATGGGGCACTACTTAAAAAAAGTCGAAAAATAGGAAAAAACATTCAACGTATAGCCGGTATCTTAC
TCATTTTAATCGGGCTTTATGATGCTGCTCTTTATTGGTAG

Upstream 100 bases:

>100_bases
TAAAACGTGGACGCAACTTACTAAAGAGGGAACATTACAATTTAATTAGAAAGGTGAATATAACGTGTTTTCAACGATTA
GTGAATGGAGCTATCAACTC

Downstream 100 bases:

>100_bases
TACATATGAAAAGGTAAGTTCAACTCATGTGAACTTACCTTTTTAAAATTATATTTAACTCTTCTGCATGCCCTTTTGCT
TCATCTCCCACTTTTTATAC

Product: cytochrome c biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSPLIDVANATKSVPLLFAFLLGIVGTLAPCQLTGNISAITLYGNQSLQKRYAWKHILLFILGKIIAFTTLGLLVWFLGK
EIQQILTLYFPWLRKMMGPLLVLMGLLLSGIIKGRYFFSIKFIRNQNEVGSFLLGFFFSLAFCPTMFVLFFGTLIPLSLS
YTYGYLFPSFFSVGTALPIVIFMFIISYLGLNGALLKKSRKIGKNIQRIAGILLILIGLYDAALYW

Sequences:

>Translated_226_residues
MSPLIDVANATKSVPLLFAFLLGIVGTLAPCQLTGNISAITLYGNQSLQKRYAWKHILLFILGKIIAFTTLGLLVWFLGK
EIQQILTLYFPWLRKMMGPLLVLMGLLLSGIIKGRYFFSIKFIRNQNEVGSFLLGFFFSLAFCPTMFVLFFGTLIPLSLS
YTYGYLFPSFFSVGTALPIVIFMFIISYLGLNGALLKKSRKIGKNIQRIAGILLILIGLYDAALYW
>Mature_225_residues
SPLIDVANATKSVPLLFAFLLGIVGTLAPCQLTGNISAITLYGNQSLQKRYAWKHILLFILGKIIAFTTLGLLVWFLGKE
IQQILTLYFPWLRKMMGPLLVLMGLLLSGIIKGRYFFSIKFIRNQNEVGSFLLGFFFSLAFCPTMFVLFFGTLIPLSLSY
TYGYLFPSFFSVGTALPIVIFMFIISYLGLNGALLKKSRKIGKNIQRIAGILLILIGLYDAALYW

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25337; Mature: 25206

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLIDVANATKSVPLLFAFLLGIVGTLAPCQLTGNISAITLYGNQSLQKRYAWKHILLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHH
ILGKIIAFTTLGLLVWFLGKEIQQILTLYFPWLRKMMGPLLVLMGLLLSGIIKGRYFFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEE
KFIRNQNEVGSFLLGFFFSLAFCPTMFVLFFGTLIPLSLSYTYGYLFPSFFSVGTALPIV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFMFIISYLGLNGALLKKSRKIGKNIQRIAGILLILIGLYDAALYW
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPLIDVANATKSVPLLFAFLLGIVGTLAPCQLTGNISAITLYGNQSLQKRYAWKHILLF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHH
ILGKIIAFTTLGLLVWFLGKEIQQILTLYFPWLRKMMGPLLVLMGLLLSGIIKGRYFFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEE
KFIRNQNEVGSFLLGFFFSLAFCPTMFVLFFGTLIPLSLSYTYGYLFPSFFSVGTALPIV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFMFIISYLGLNGALLKKSRKIGKNIQRIAGILLILIGLYDAALYW
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA