Click here to switch to the map view.

The map label for this gene is hsp [H]

Identifier: 52143193

GI number: 52143193

Start: 2162824

End: 2163261

Strand: Direct

Name: hsp [H]

Synonym: BCZK2043

Alternate gene names: 52143193

Gene position: 2162824-2163261 (Clockwise)

Preceding gene: 52143197

Following gene: 52143194

Centisome position: 40.8

GC content: 29.45

Gene sequence:

>438_bases
ATGCGTAATTTATTTCCAGAAATAACAAAACGTCAAAATAGTATTTTTGATTTTGGGCCTTCTTTATTAGAAGGGATGAC
AGATGCTTTCTTCAAACCGATGAACATGGATACTTTTAAAGTAGATGTTCATGAACAATCTGATAAATATACAGTGAAAG
CAGATTTACCAGGTTTTCAAAAAGAAAACATTCAAGTTGAATTTGAACAAGATGTATTAACGATTCAAGCAACTAATCAT
AATGAAGTAGAAGAAAAAAATGAGAATGGCACATATATTCGTAAAGAACGTTCTATAGGTTCTGTAACTCGACGTTTTAG
TTTTAAACAAGTTGAGGAAGAAAATGTTAGAGCAAATTACAAAGATGGCGTGTTGACAATTGAATTGCCAAAATTGAAAG
AAGAAAAAAACAGTAAAACAACAATTAATATTGAATAA

Upstream 100 bases:

>100_bases
AAAAAAGGTCAAATAAAATCTTTGACCTTTTTTGACCAAATGTTATAATAAAGACAGAAAGAGATAATCTTTCATTCATA
AACAATAAGGAGGAAAAAAT

Downstream 100 bases:

>100_bases
AAGAGCTGATAAATTCAGCTCTTTTTTGTACTTATTTAATACATAAGTTAGTTGAAATCGAAATGAGCTGAATACAGTTT
TAACGTTTAAAAAAATTTAC

Product: heat shock protein

Products: NA

Alternate protein names: HSP 18 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRNLFPEITKRQNSIFDFGPSLLEGMTDAFFKPMNMDTFKVDVHEQSDKYTVKADLPGFQKENIQVEFEQDVLTIQATNH
NEVEEKNENGTYIRKERSIGSVTRRFSFKQVEEENVRANYKDGVLTIELPKLKEEKNSKTTINIE

Sequences:

>Translated_145_residues
MRNLFPEITKRQNSIFDFGPSLLEGMTDAFFKPMNMDTFKVDVHEQSDKYTVKADLPGFQKENIQVEFEQDVLTIQATNH
NEVEEKNENGTYIRKERSIGSVTRRFSFKQVEEENVRANYKDGVLTIELPKLKEEKNSKTTINIE
>Mature_145_residues
MRNLFPEITKRQNSIFDFGPSLLEGMTDAFFKPMNMDTFKVDVHEQSDKYTVKADLPGFQKENIQVEFEQDVLTIQATNH
NEVEEKNENGTYIRKERSIGSVTRRFSFKQVEEENVRANYKDGVLTIELPKLKEEKNSKTTINIE

Specific function: Probable chaperone [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16926; Mature: 16926

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLFPEITKRQNSIFDFGPSLLEGMTDAFFKPMNMDTFKVDVHEQSDKYTVKADLPGFQ
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCC
KENIQVEFEQDVLTIQATNHNEVEEKNENGTYIRKERSIGSVTRRFSFKQVEEENVRANY
CCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCC
KDGVLTIELPKLKEEKNSKTTINIE
CCCEEEEECCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRNLFPEITKRQNSIFDFGPSLLEGMTDAFFKPMNMDTFKVDVHEQSDKYTVKADLPGFQ
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCC
KENIQVEFEQDVLTIQATNHNEVEEKNENGTYIRKERSIGSVTRRFSFKQVEEENVRANY
CCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCC
KDGVLTIELPKLKEEKNSKTTINIE
CCCEEEEECCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501044; 11466286 [H]