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The map label for this gene is oppC [C]

Identifier: 52143188

GI number: 52143188

Start: 2168387

End: 2169436

Strand: Reverse

Name: oppC [C]

Synonym: BCZK2049

Alternate gene names: 52143188

Gene position: 2169436-2168387 (Counterclockwise)

Preceding gene: 52143187

Following gene: 52143195

Centisome position: 40.93

GC content: 33.71

Gene sequence:

>1050_bases
GTGGCAAAAGCAATTGAAAGGAGCAGCTTTATGAAATCTATTTGGAAATCAAAACGCTTTTTAATCGGCTTTACTTATTT
ATTCATACTTGTTTCAGCTAGTTTTATTTATAGTTGGTTCTTTAAAGATACCATCCCAAAAGCTCCCCAGTTACTTTACA
ATGACAATAACGAATTACTTGGAAAGGCTCCCTTTCCACCATCATTAATACCGCCTTTTGGATCGGATCGTTTTGGAGAG
TCTGTTTTCTTACAAATTATAGAAGGAGCAAAGTTCACCATTTTATTAGCCGTGGTAATTAGCTTCTTTCGCATATTATT
CGGAACATGTATAGGAATACTCTTAAGTTTATACGCTTCAAAATTCAAGAGATTTTTCCAGGCACGCTCAGAAGTTTTTT
ACTATATTCCTACTTTATTTATCGCATTTATACTCATCACACCTGTTAATATTGTAATCGTATCAAATGCTGATAGATTA
GATCCAAATATTTCATTTGCGTTTTATCAAGTACTCGTACTTATATTCGTCGCACTGCCTACACTTTCTTTATATATATC
CTCAGAGGTTGATGAATTTATGAAACAAGATTACATTTTAAGTTCCCAATTGCTAGGAGCTAGCCGTTTTCATATTATCA
AAAAACACTTACGAGTCTTGTTACTTGATCGCTTATTTGTGTTATTTATGGAACATATTGTCCAAGCGCTCATACTCGTT
ATCCATTTAGCGTTGCTTGATATTATAATTGGCGGGATCCAAATGCGGGAACTCTATGATGGAGCGCTCAAACCTGTTTC
TCTATCTAATGATTGGGCTGGCCTTATTGGATTAAATCGTTATGAAATGAATCTTTCGTGGTGGATTATTTTTTATTCTC
TCGCTTCATTCTTTATTACGATTCTATTTATTAAGCTTATGACAATCGGGATTCAAGATGCACTGAAAGCAAGAGATTCG
CAAACTGTAGCAATTCAATCTGTTCCAGATCAAAAGAAATTTGTTAAACATAAAGATTCTTTTTCTTTTGCAAATAAAGT
AAACCTTTAA

Upstream 100 bases:

>100_bases
AAAAGGCGTTTATTTCACCACCAGCTGCATTTATCATACTTGTGATGATTATTTTACCGTTTTACGCCATTTTTCAAATC
ATCTCTTTCATGATGAATAG

Downstream 100 bases:

>100_bases
TCATCTCTCATAAATCAAGTATGAATTGGCATTGATATTAGTAGAATATAAAAAAGATGATCCCTATTAAATACAGAGAT
CATCTTTTTTATACCGTCTA

Product: oligopeptide transport system, permease

Products: NA

Alternate protein names: Oligopeptide Transport System Permease; Peptide ABC Transporter Permease; Oligopeptide Permease OppC; ABC Transporter; Dipeptide Transport System Permease; Oligopeptide Transport System Permease Protein OppC; ABC-Type Transport System Permease Protein; Oligopeptide Transport System Permease Protein-Like Protein; Oligopeptide Transport System Permease Protein AppC; Peptide ABC Transporter Permease Protein

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELLGKAPFPPSLIPPFGSDRFGE
SVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYASKFKRFFQARSEVFYYIPTLFIAFILITPVNIVIVSNADRL
DPNISFAFYQVLVLIFVALPTLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQALILV
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFITILFIKLMTIGIQDALKARDS
QTVAIQSVPDQKKFVKHKDSFSFANKVNL

Sequences:

>Translated_349_residues
MAKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELLGKAPFPPSLIPPFGSDRFGE
SVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYASKFKRFFQARSEVFYYIPTLFIAFILITPVNIVIVSNADRL
DPNISFAFYQVLVLIFVALPTLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQALILV
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFITILFIKLMTIGIQDALKARDS
QTVAIQSVPDQKKFVKHKDSFSFANKVNL
>Mature_348_residues
AKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELLGKAPFPPSLIPPFGSDRFGES
VFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYASKFKRFFQARSEVFYYIPTLFIAFILITPVNIVIVSNADRLD
PNISFAFYQVLVLIFVALPTLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQALILVI
HLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFITILFIKLMTIGIQDALKARDSQ
TVAIQSVPDQKKFVKHKDSFSFANKVNL

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yddopqrs. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787760, Length=278, Percent_Identity=22.6618705035971, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787054, Length=252, Percent_Identity=21.031746031746, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39971; Mature: 39840

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCC
GKAPFPPSLIPPFGSDRFGESVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFKRFFQARSEVFYYIPTLFIAFILITPVNIVIVSNADRLDPNISFAFYQVLVLIFVALP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQALILV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFIT
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEECHHHHHHHHHHHHHHHH
ILFIKLMTIGIQDALKARDSQTVAIQSVPDQKKFVKHKDSFSFANKVNL
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure 
AKAIERSSFMKSIWKSKRFLIGFTYLFILVSASFIYSWFFKDTIPKAPQLLYNDNNELL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCC
GKAPFPPSLIPPFGSDRFGESVFLQIIEGAKFTILLAVVISFFRILFGTCIGILLSLYAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFKRFFQARSEVFYYIPTLFIAFILITPVNIVIVSNADRLDPNISFAFYQVLVLIFVALP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TLSLYISSEVDEFMKQDYILSSQLLGASRFHIIKKHLRVLLLDRLFVLFMEHIVQALILV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHLALLDIIIGGIQMRELYDGALKPVSLSNDWAGLIGLNRYEMNLSWWIIFYSLASFFIT
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEECHHHHHHHHHHHHHHHH
ILFIKLMTIGIQDALKARDSQTVAIQSVPDQKKFVKHKDSFSFANKVNL
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA