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The map label for this gene is 52143039

Identifier: 52143039

GI number: 52143039

Start: 2325635

End: 2326357

Strand: Reverse

Name: 52143039

Synonym: BCZK2198

Alternate gene names: NA

Gene position: 2326357-2325635 (Counterclockwise)

Preceding gene: 52143036

Following gene: 52143042

Centisome position: 43.89

GC content: 38.31

Gene sequence:

>723_bases
GTGATTTATATTCAAGATAAGAATGAAAAAATAAAAAAAAATCTATTATCACTGGCTCTTGAAATTATTCTTCCATACAG
ACTTACAGGTCCTACAGGTATCACTGGTCCCACAGGCATCACTGGTCCTACAGGCATCACTGGTCCTACAGGCATCACTG
GTCCTACAGGCATCACTGGTCCTACAGGCATCACTGGTCCTACAGGCATCACTGGTCCTACAGGCATCACTGGTCCTACA
GGCATCACTGGTCCTACAGGCATCACTGGTCCTACAGGCATCACTGGTCCTACAGGCATCACTGGTCCCAATATTACAAC
AAACTCTATGTTTTCAAATAATACATTAGGTGGTCCCATTTCGGTCATATTAGGTGGAACTAATATTCCACTTTCTAATA
ACCAAAGTCTCGGGAATTTTACAGTGAACGCTTCAAATGATATATTTACAATTCCTGTTACTGGGAGATATTATTTAACT
TATCAAGTTAATACGACAACTGCACTACTTGCTGGTACAAGGTTACTATTAAACTCTTCGACTCCACTTTCCGGATCTAT
TTTTTCCCCCGCAATATCAACTTCAAATTATAATAATAATTTAATAATCAATTTAATTGCTGGTAATACAATTTCACTTC
AACTATTTGGCGTATTATCCATAGTTAATTTAGTTGGAGGTGGTTCAACAGGTGCCTCTTTAACAATTATACGAATCGAT
TAA

Upstream 100 bases:

>100_bases
TTAAACTTTTTACCGTTTCTATAACTAGTAGTATTCATATTATAAAATGATAGCTCTATTTCAAAATACTAAATTGGTTA
CGTTCTAATTAAGAGATGAG

Downstream 100 bases:

>100_bases
AAAATGATTCGTTCTTTTTTATAATCATCATTCTTAAATGCTAAAATAGTAACTATTACATCATCCCTTAAGCTTATATA
CTAACAACTTCACGACAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat Domain Protein; BclA Protein; Collagen-Like Protein

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIYIQDKNEKIKKNLLSLALEIILPYRLTGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPT
GITGPTGITGPTGITGPTGITGPNITTNSMFSNNTLGGPISVILGGTNIPLSNNQSLGNFTVNASNDIFTIPVTGRYYLT
YQVNTTTALLAGTRLLLNSSTPLSGSIFSPAISTSNYNNNLIINLIAGNTISLQLFGVLSIVNLVGGGSTGASLTIIRID

Sequences:

>Translated_240_residues
MIYIQDKNEKIKKNLLSLALEIILPYRLTGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPT
GITGPTGITGPTGITGPTGITGPNITTNSMFSNNTLGGPISVILGGTNIPLSNNQSLGNFTVNASNDIFTIPVTGRYYLT
YQVNTTTALLAGTRLLLNSSTPLSGSIFSPAISTSNYNNNLIINLIAGNTISLQLFGVLSIVNLVGGGSTGASLTIIRID
>Mature_240_residues
MIYIQDKNEKIKKNLLSLALEIILPYRLTGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPT
GITGPTGITGPTGITGPTGITGPNITTNSMFSNNTLGGPISVILGGTNIPLSNNQSLGNFTVNASNDIFTIPVTGRYYLT
YQVNTTTALLAGTRLLLNSSTPLSGSIFSPAISTSNYNNNLIINLIAGNTISLQLFGVLSIVNLVGGGSTGASLTIIRID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI65301115, Length=214, Percent_Identity=29.9065420560748, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI56847616, Length=214, Percent_Identity=29.9065420560748, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24171; Mature: 24171

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYIQDKNEKIKKNLLSLALEIILPYRLTGPTGITGPTGITGPTGITGPTGITGPTGITG
CEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPNITTNSMFSNNTLGGPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCEE
SVILGGTNIPLSNNQSLGNFTVNASNDIFTIPVTGRYYLTYQVNTTTALLAGTRLLLNSS
EEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEEEEEEECCCEEEEECEEEEEECC
TPLSGSIFSPAISTSNYNNNLIINLIAGNTISLQLFGVLSIVNLVGGGSTGASLTIIRID
CCCCCCCCCCEECCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHCCCCCCCEEEEEEEC
>Mature Secondary Structure
MIYIQDKNEKIKKNLLSLALEIILPYRLTGPTGITGPTGITGPTGITGPTGITGPTGITG
CEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPTGITGPNITTNSMFSNNTLGGPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCEE
SVILGGTNIPLSNNQSLGNFTVNASNDIFTIPVTGRYYLTYQVNTTTALLAGTRLLLNSS
EEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEEEEEEECCCEEEEECEEEEEECC
TPLSGSIFSPAISTSNYNNNLIINLIAGNTISLQLFGVLSIVNLVGGGSTGASLTIIRID
CCCCCCCCCCEECCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA