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The map label for this gene is rapF [H]

Identifier: 52142977

GI number: 52142977

Start: 2393749

End: 2394861

Strand: Reverse

Name: rapF [H]

Synonym: BCZK2262

Alternate gene names: 52142977

Gene position: 2394861-2393749 (Counterclockwise)

Preceding gene: 52142974

Following gene: 52142979

Centisome position: 45.18

GC content: 28.57

Gene sequence:

>1113_bases
ATGGGGGATATTATGACTGTTCAAGAAAAAAGTAATAAACAATTGATGGAATTATTACATGAATGGTATGAAGAAATTCG
TTTATATCATGTAGTAGAAGCAAAACAAACATATCTAAAAGTAAAAGAAAGTTTAAAAGGAATAGAAACAAACCAATATG
TATCATTCTATTATTCCCTGCTGAATTTTAGATATAAAGTTTTAGTAGATGGAATGAGTATTACAAAAGATTCTTTTAAT
CAAATAGAAAAACTACCTCATATTAAAGATGAATTTTCATTTTTAGCTTACTATTATTATTTCTTTAAGGCAATCCACTC
TACAATTATAGCAAATTATACTGAGGCAAAAACATACTATGAAAAGGCGGAAGGACTTTTAAAAGATATACCTGACGAAA
TAGAAAAAGCTGAGTTTGAGTATAGATTTTCAACATATTGTTATCAATCTTATCAACCATTTGAAGCAATTCAACATGCA
GTAAAAGCCAAAGAAATATATTTGAATCATGTAGGCTATAAAATTAATATTGCTTTATGCGACAATGTATATGGACTGGC
TTGTATAGATCTAAGAGAATTTGAAAGAGCGGAAGAATGTCTCAATATGGTTATTGATATTTTTAAGAAGTATGATGAAG
AACAATTATTATTACGAGTACGATCCAATTTAGGCTGGTTATATAATATTCAAGATTTATATCCATTGGCGATTAGACAG
AGTTCTGAAATTATAAATACCATACCGAACCATTTTAAAGCATTATTTGTCTTAGCAAGAGCATATTATAAGTTAGAAGG
CATTGAAACAGCAAGAGCATATATCGAGCAAGGAATGAAATATACAAATGAATCAGGAAATGAGGAATATAAACACCGTT
TCGCAGTTTTAAATGAACTAATTACAGAACCGCCTAGAATTAAACTAGAAAAAGTAGTTACTGATGCCATTTCTTATTTT
GAAAAAGAGGAAATGTGGGATTGTGTAAAAGAATATGCAGAGATTTTAGCACTGCAATTTTACGAAACAAATAATCATGT
TAAAGCGAGTAAGTATTTCTATATTAGTAATAATGCTGATAAGAAACATTTAAGAAAAGGAGCGTTAAAGTAA

Upstream 100 bases:

>100_bases
ACTATTTAATTCATAATATTCTGTATATTTATGAAAAAAATCATGATTAAATTTAATTTATCGAATTCCTGTTATTATCA
GAATAAGCCTTTACAGAGAA

Downstream 100 bases:

>100_bases
TGAAAAAAATAAAAAAATTGTTATTCAGTACGATAATAGTAAGTACATTAGCATGTAGCATGATTAGTTTAAATGTATCA
CAACACTCTTCATTTAATGG

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MGDIMTVQEKSNKQLMELLHEWYEEIRLYHVVEAKQTYLKVKESLKGIETNQYVSFYYSLLNFRYKVLVDGMSITKDSFN
QIEKLPHIKDEFSFLAYYYYFFKAIHSTIIANYTEAKTYYEKAEGLLKDIPDEIEKAEFEYRFSTYCYQSYQPFEAIQHA
VKAKEIYLNHVGYKINIALCDNVYGLACIDLREFERAEECLNMVIDIFKKYDEEQLLLRVRSNLGWLYNIQDLYPLAIRQ
SSEIINTIPNHFKALFVLARAYYKLEGIETARAYIEQGMKYTNESGNEEYKHRFAVLNELITEPPRIKLEKVVTDAISYF
EKEEMWDCVKEYAEILALQFYETNNHVKASKYFYISNNADKKHLRKGALK

Sequences:

>Translated_370_residues
MGDIMTVQEKSNKQLMELLHEWYEEIRLYHVVEAKQTYLKVKESLKGIETNQYVSFYYSLLNFRYKVLVDGMSITKDSFN
QIEKLPHIKDEFSFLAYYYYFFKAIHSTIIANYTEAKTYYEKAEGLLKDIPDEIEKAEFEYRFSTYCYQSYQPFEAIQHA
VKAKEIYLNHVGYKINIALCDNVYGLACIDLREFERAEECLNMVIDIFKKYDEEQLLLRVRSNLGWLYNIQDLYPLAIRQ
SSEIINTIPNHFKALFVLARAYYKLEGIETARAYIEQGMKYTNESGNEEYKHRFAVLNELITEPPRIKLEKVVTDAISYF
EKEEMWDCVKEYAEILALQFYETNNHVKASKYFYISNNADKKHLRKGALK
>Mature_369_residues
GDIMTVQEKSNKQLMELLHEWYEEIRLYHVVEAKQTYLKVKESLKGIETNQYVSFYYSLLNFRYKVLVDGMSITKDSFNQ
IEKLPHIKDEFSFLAYYYYFFKAIHSTIIANYTEAKTYYEKAEGLLKDIPDEIEKAEFEYRFSTYCYQSYQPFEAIQHAV
KAKEIYLNHVGYKINIALCDNVYGLACIDLREFERAEECLNMVIDIFKKYDEEQLLLRVRSNLGWLYNIQDLYPLAIRQS
SEIINTIPNHFKALFVLARAYYKLEGIETARAYIEQGMKYTNESGNEEYKHRFAVLNELITEPPRIKLEKVVTDAISYFE
KEEMWDCVKEYAEILALQFYETNNHVKASKYFYISNNADKKHLRKGALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 44012; Mature: 43881

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIMTVQEKSNKQLMELLHEWYEEIRLYHVVEAKQTYLKVKESLKGIETNQYVSFYYSL
CCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LNFRYKVLVDGMSITKDSFNQIEKLPHIKDEFSFLAYYYYFFKAIHSTIIANYTEAKTYY
HHHHHHHEECCCHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKAEGLLKDIPDEIEKAEFEYRFSTYCYQSYQPFEAIQHAVKAKEIYLNHVGYKINIALC
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEE
DNVYGLACIDLREFERAEECLNMVIDIFKKYDEEQLLLRVRSNLGWLYNIQDLYPLAIRQ
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHHH
SSEIINTIPNHFKALFVLARAYYKLEGIETARAYIEQGMKYTNESGNEEYKHRFAVLNEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ITEPPRIKLEKVVTDAISYFEKEEMWDCVKEYAEILALQFYETNNHVKASKYFYISNNAD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEECCCC
KKHLRKGALK
HHHHHHCCCC
>Mature Secondary Structure 
GDIMTVQEKSNKQLMELLHEWYEEIRLYHVVEAKQTYLKVKESLKGIETNQYVSFYYSL
CCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LNFRYKVLVDGMSITKDSFNQIEKLPHIKDEFSFLAYYYYFFKAIHSTIIANYTEAKTYY
HHHHHHHEECCCHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKAEGLLKDIPDEIEKAEFEYRFSTYCYQSYQPFEAIQHAVKAKEIYLNHVGYKINIALC
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEE
DNVYGLACIDLREFERAEECLNMVIDIFKKYDEEQLLLRVRSNLGWLYNIQDLYPLAIRQ
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHHH
SSEIINTIPNHFKALFVLARAYYKLEGIETARAYIEQGMKYTNESGNEEYKHRFAVLNEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ITEPPRIKLEKVVTDAISYFEKEEMWDCVKEYAEILALQFYETNNHVKASKYFYISNNAD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEECCCC
KKHLRKGALK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]