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The map label for this gene is pepF [H]

Identifier: 52142913

GI number: 52142913

Start: 2459124

End: 2460815

Strand: Reverse

Name: pepF [H]

Synonym: BCZK2327

Alternate gene names: 52142913

Gene position: 2460815-2459124 (Counterclockwise)

Preceding gene: 52142902

Following gene: 52142918

Centisome position: 46.42

GC content: 29.96

Gene sequence:

>1692_bases
ATGCAGCGCTTAAATACGATTGATATTAGTAACGCTCTAGAATTAGAAAATACTCTTTCTACTTTATTGAATGAAATGAT
TTCTTCAAAGCTAGAACTTGAAAACTGGTTAAAAAAACAATCTACTTTCATTTGGGAAATTGAAGAACAATTAAGGTCGC
ACTATATCGCTTTTCAATGTAATACAGATAATAAAGAAATAAAAGATACTTTTGAATATGATCAAAAATATGTACGACCT
CTTTTGAAACGTTATCAAAATTCATTTGATACTAAATATTTAGAGTCCCCTTTTCGAATGGAACTTAATCCAAAAACGTA
CAGCTTACTAGATAAAAAAATTAAGAATGCGCAAACATTATTTTGTGAAAAGAATATTGATTTAGAAGTGAACGAAGACA
AATTAATAACCGAATACTTCGAAATCACAGGTGGTTTAACTGCATTATGGAACGGTGAAGAAAAAACAATTACTGAACTA
CAATCTTACTTACAAGATCCGGATCGTCATATACGAAAAAAAGCAAAAACGCTCATTTCTGAAACATTCTTATCTGTTGA
AGATAAATTACAACATATATTAAATGAATTAATCGTAATCCGTGACCAAAAAGCAAAAAACATTCAATTACATAATTATC
GTGATTATATGTTTAAAAAACATGAACGTTTTGATTATACACCTGAAGACTGCTATGAGCTTGCCGAATCTATTCGTAAA
TACGTAGTACCACTTATCGATAAAATATATAATAAGAAAAAATCTGAACTTCAAGTAGAAAGTCTTCGTCCATGGGATTT
AAAAGCAACCGCACCAAATCAAAAAGTATTAAAACCTATTGAAAAAGCGAGTGATTTAATCGAAAAAAGTTCTCATATTT
TACACAAACTTGACCATGAATTTTCCGCATTACTGGAACGTATGCATAAAAATAATTGCCTAGATTTAGAAAGTCGGAAA
GGAAAAGGACCAGGAGGATTTTGCGAATATTTACCTGTTTCTCAATTATCTTTTATTTTCATGAATCTCAATCATACACA
TTATGATGTTACTATTTTCCTCCATGAAATGGGCCATAGTATTCATAATGATTGTATGAAGCAGTTAGAACTTCAAAAGT
ATTTAGAAATCCCTTCAGAATCAGCGGAACTAGCTAGTATGACAATGGAATTGTTTTCGATGGAGTATTGGGATACTTTT
TATGAAAATAAAGAAGAATTTATAGAAGTAAAATTAGAGTTCTTTAAAGGTATTGTTAAATATTTTCCACAAATGCTTAT
AGTTGATCAATTCCAACATTGGATGTATGAAAATCCTACTCATACAGCTAAAGAAAGAAATGAAAAATATTTAGAATTAC
ATAACACTTACCAATCGAATGTAGTAAATATTGAGGGGTATGAAAATTGGGTTGCAACTGGCTGGTTACCTGTGCTACAT
ATATTCGAAATACCATTCTATTACATCGAATATGCAATTGCACAACTTGGTGCGCTGCAAATGTATAAACAATATAAAGA
AAATCCTAAACAAGCACTTAAAAATTATAAAAAAGCCTTATCATTAGGTAGCTCTAAATCTTTAACGGAAGTATATGAAG
CAGCTGGAATTCGTTTTGATTTTTCTGGCGAAATAATTAAAGAACTAATGTTATTTGTAGAGGGAGAATTAGAGTTACTT
GAACAATTGTAA

Upstream 100 bases:

>100_bases
ATTAAATTTAACATTTTTTCACATTTTCTCCTCTTAAAAAGGAAATTATAATTAATAAATAGAATATCTTCATGAATAAA
TAAAAAGTGAGGGATATGTC

Downstream 100 bases:

>100_bases
AAAGAAAGCTGCACCTATATTTTTGGTGTAGCTTTCTTCTTTATTTTATTAATCAGCTCTATGTACTGGGAATCCCCATA
TCCGATTGTTGGAAATAGCT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MQRLNTIDISNALELENTLSTLLNEMISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELNPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLITEYFEITGGLTALWNGEEKTITEL
QSYLQDPDRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHEFSALLERMHKNNCLDLESRK
GKGPGGFCEYLPVSQLSFIFMNLNHTHYDVTIFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIEVKLEFFKGIVKYFPQMLIVDQFQHWMYENPTHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALKNYKKALSLGSSKSLTEVYEAAGIRFDFSGEIIKELMLFVEGELELL
EQL

Sequences:

>Translated_563_residues
MQRLNTIDISNALELENTLSTLLNEMISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELNPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLITEYFEITGGLTALWNGEEKTITEL
QSYLQDPDRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHEFSALLERMHKNNCLDLESRK
GKGPGGFCEYLPVSQLSFIFMNLNHTHYDVTIFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIEVKLEFFKGIVKYFPQMLIVDQFQHWMYENPTHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALKNYKKALSLGSSKSLTEVYEAAGIRFDFSGEIIKELMLFVEGELELL
EQL
>Mature_563_residues
MQRLNTIDISNALELENTLSTLLNEMISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELNPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLITEYFEITGGLTALWNGEEKTITEL
QSYLQDPDRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHEFSALLERMHKNNCLDLESRK
GKGPGGFCEYLPVSQLSFIFMNLNHTHYDVTIFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIEVKLEFFKGIVKYFPQMLIVDQFQHWMYENPTHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALKNYKKALSLGSSKSLTEVYEAAGIRFDFSGEIIKELMLFVEGELELL
EQL

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 66847; Mature: 66847

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLNTIDISNALELENTLSTLLNEMISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NTDNKEIKDTFEYDQKYVRPLLKRYQNSFDTKYLESPFRMELNPKTYSLLDKKIKNAQTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHHHHHHHHHHCCHHHE
FCEKNIDLEVNEDKLITEYFEITGGLTALWNGEEKTITELQSYLQDPDRHIRKKAKTLIS
EEECCCCEEECCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
ETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHE
HHHHHHHHHHCCCHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSALLERMHKNNCLDLESRKGKGPGGFCEYLPVSQLSFIFMNLNHTHYDVTIFLHEMGHS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCEEEEEEHHHHHCCH
IHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTFYENKEEFIEVKLEFFKGIVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YFPQMLIVDQFQHWMYENPTHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
HHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALKNYKKALSLGSSKSLTEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEC
FSGEIIKELMLFVEGELELLEQL
CCHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MQRLNTIDISNALELENTLSTLLNEMISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NTDNKEIKDTFEYDQKYVRPLLKRYQNSFDTKYLESPFRMELNPKTYSLLDKKIKNAQTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHHHHHHHHHHCCHHHE
FCEKNIDLEVNEDKLITEYFEITGGLTALWNGEEKTITELQSYLQDPDRHIRKKAKTLIS
EEECCCCEEECCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
ETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHE
HHHHHHHHHHCCCHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSALLERMHKNNCLDLESRKGKGPGGFCEYLPVSQLSFIFMNLNHTHYDVTIFLHEMGHS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCEEEEEEHHHHHCCH
IHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTFYENKEEFIEVKLEFFKGIVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YFPQMLIVDQFQHWMYENPTHTAKERNEKYLELHNTYQSNVVNIEGYENWVATGWLPVLH
HHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALKNYKKALSLGSSKSLTEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEC
FSGEIIKELMLFVEGELELLEQL
CCHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]