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The map label for this gene is yedA [C]

Identifier: 52142768

GI number: 52142768

Start: 2607105

End: 2608022

Strand: Reverse

Name: yedA [C]

Synonym: BCZK2471

Alternate gene names: 52142768

Gene position: 2608022-2607105 (Counterclockwise)

Preceding gene: 52142766

Following gene: 52142770

Centisome position: 49.2

GC content: 33.12

Gene sequence:

>918_bases
ATGGTCATTTTTAATTATATTTTAGTATGTATTATTTTCGGAACAACATTTTTAACAATAAAAATCGGAATTGAAGCAGG
AGCGCCCCCATTATTTTCAGCAGGAATTCGTTTCTTTTTAGCAGGAGTAATTCTGATGATTATATTTAAGTTAAAGCGAA
AAGAAATTATGCCACATGTATTTTCAAAACGTATTATGTATGCTGGTTTTTGCTTAACGTTTATGACATTCGCTACTTTG
TACTGGGCGGAACAATATATTTCTTCAGGGTTAGCTGCTGTGCTTTCTGCTACGGGACCGATGATGATTTTGTTATTACA
AGCGAAGAGAAATAAGTCAAAACTACAAAAGGAGCAACTGCTAGCTTTAATTATTGCACTAATAGGCGTTGTTTTTGTTT
CTTTACCAGGAATGCACCAAGAAGTAAGTTTCATATGGAGTATCGCTTGTTTTGTATTAATAATAGGAGAATTTTTTTAC
GGAATAGGCTCTATTCGCTCAAAAGAAATACTTTCGGATTTACAAAGCGTATCGCCATTTCTTATTAACGGTATTCAAAT
GTTTTATGGAGGGATTTTACTACTAATTGTATCAATAATTGTAGAACAGCCAAATGTAACTATATTAACTTCATGGAGTG
TACAATGGCCTATTTTATATCTTATCTTTATCGGATCAATTGGTGGACACGGATTATATTATTGGCTCTTATCAAAAACA
AATCCTGTATTCCCGTCAACTTGGTTATATGTCTCTCCATTAATTGCTATTATTGTAGGATATATCATATTAGGAGAACC
TTTAAACCCTACAATGGGAATAGGTGCTTGTTTCATTTTGGTTGGTGTATTTTTAGCTAATCGATCCACACTCCGGTCTT
ATTTCAAACAAGGAAGATTATTTGAGAAGGAAATGTAG

Upstream 100 bases:

>100_bases
GAGAATCAACTACAATTTTAGGCAACTGTTATATACATAGATACACTGTTATACACTATACCTTCTATACTCATGTTAAG
AGTAAAAAGGAGGAAGAGTA

Downstream 100 bases:

>100_bases
TTGTATAAAGTAGCAGCCCTGCATATAACAGGGCTGCTTTCATTTTATTCATGATACGGATTGACTTTATTTATTGGAAA
GGCGTAATATTATTAAGCTA

Product: drug/metabolite exporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVIFNYILVCIIFGTTFLTIKIGIEAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHVFSKRIMYAGFCLTFMTFATL
YWAEQYISSGLAAVLSATGPMMILLLQAKRNKSKLQKEQLLALIIALIGVVFVSLPGMHQEVSFIWSIACFVLIIGEFFY
GIGSIRSKEILSDLQSVSPFLINGIQMFYGGILLLIVSIIVEQPNVTILTSWSVQWPILYLIFIGSIGGHGLYYWLLSKT
NPVFPSTWLYVSPLIAIIVGYIILGEPLNPTMGIGACFILVGVFLANRSTLRSYFKQGRLFEKEM

Sequences:

>Translated_305_residues
MVIFNYILVCIIFGTTFLTIKIGIEAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHVFSKRIMYAGFCLTFMTFATL
YWAEQYISSGLAAVLSATGPMMILLLQAKRNKSKLQKEQLLALIIALIGVVFVSLPGMHQEVSFIWSIACFVLIIGEFFY
GIGSIRSKEILSDLQSVSPFLINGIQMFYGGILLLIVSIIVEQPNVTILTSWSVQWPILYLIFIGSIGGHGLYYWLLSKT
NPVFPSTWLYVSPLIAIIVGYIILGEPLNPTMGIGACFILVGVFLANRSTLRSYFKQGRLFEKEM
>Mature_305_residues
MVIFNYILVCIIFGTTFLTIKIGIEAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHVFSKRIMYAGFCLTFMTFATL
YWAEQYISSGLAAVLSATGPMMILLLQAKRNKSKLQKEQLLALIIALIGVVFVSLPGMHQEVSFIWSIACFVLIIGEFFY
GIGSIRSKEILSDLQSVSPFLINGIQMFYGGILLLIVSIIVEQPNVTILTSWSVQWPILYLIFIGSIGGHGLYYWLLSKT
NPVFPSTWLYVSPLIAIIVGYIILGEPLNPTMGIGACFILVGVFLANRSTLRSYFKQGRLFEKEM

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=260, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34071; Mature: 34071

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFNYILVCIIFGTTFLTIKIGIEAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHV
CHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKRIMYAGFCLTFMTFATLYWAEQYISSGLAAVLSATGPMMILLLQAKRNKSKLQKEQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH
LALIIALIGVVFVSLPGMHQEVSFIWSIACFVLIIGEFFYGIGSIRSKEILSDLQSVSPF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH
LINGIQMFYGGILLLIVSIIVEQPNVTILTSWSVQWPILYLIFIGSIGGHGLYYWLLSKT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCC
NPVFPSTWLYVSPLIAIIVGYIILGEPLNPTMGIGACFILVGVFLANRSTLRSYFKQGRL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCC
FEKEM
HHCCC
>Mature Secondary Structure
MVIFNYILVCIIFGTTFLTIKIGIEAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHV
CHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKRIMYAGFCLTFMTFATLYWAEQYISSGLAAVLSATGPMMILLLQAKRNKSKLQKEQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH
LALIIALIGVVFVSLPGMHQEVSFIWSIACFVLIIGEFFYGIGSIRSKEILSDLQSVSPF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH
LINGIQMFYGGILLLIVSIIVEQPNVTILTSWSVQWPILYLIFIGSIGGHGLYYWLLSKT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCC
NPVFPSTWLYVSPLIAIIVGYIILGEPLNPTMGIGACFILVGVFLANRSTLRSYFKQGRL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCC
FEKEM
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8407819; 12089438 [H]