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The map label for this gene is 52142612

Identifier: 52142612

GI number: 52142612

Start: 2743637

End: 2744146

Strand: Reverse

Name: 52142612

Synonym: BCZK2630

Alternate gene names: NA

Gene position: 2744146-2743637 (Counterclockwise)

Preceding gene: 52142610

Following gene: 52142618

Centisome position: 51.77

GC content: 31.37

Gene sequence:

>510_bases
ATGCATACAATTTTAGTTTTTTTAAATAATATGTCCATCGATAAAATAGAGAACATTAGACAAAAACATGATCCTTTATT
TGAATTAATTCCACCGCATATAACAATTGTATTTGCATTTAAGAGTAATATTTCAAATGGTGAATTAAAATCTCATATTT
TGAATTTATCAAGAGGGATAGGGAAAATTGAAATTGAATTTGCAAATCGTATTACTAGTGTAGGAAACTATTTGTTTTTA
GAAGTTGAGAGGGGGAAAGAACAAATAGCCAAACTACATGATATGCTGTATACAGAACCTTTAAGACAATTTTTGAAAGA
AGATATTCCGTACATACCGCATGTAACAGTCGGGAGAAAAGAAAGTGCGGAGTTAGCTGCTGAAGTAGCCAAGGATATTC
ATAGTTTCCCTGAAAAGTTACAATGTGTAATTGATAGAATTAGTGTAGAGCGAATTGGAGAAAAGGGGGAATCAATTATT
GAATTTGAAGTACCGTTGCAAAAAAGCTGA

Upstream 100 bases:

>100_bases
AGTTTTTTATTTTTATAGGTAAGTAAAATAATTTGTTGAAGTGCAAGATTGTTATAGAATATGATACATATTAAAATAAG
GGAAAGTAGAGGGGATAAAA

Downstream 100 bases:

>100_bases
CAAAAGTCAGCTTTTTTTATTCGTAGCATAAAGTAAAGCACCAATCGCACCGCTATTACCACCATCTCGTAAAAAGATTG
GTGTTTTATTTTGGTATTTT

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MHTILVFLNNMSIDKIENIRQKHDPLFELIPPHITIVFAFKSNISNGELKSHILNLSRGIGKIEIEFANRITSVGNYLFL
EVERGKEQIAKLHDMLYTEPLRQFLKEDIPYIPHVTVGRKESAELAAEVAKDIHSFPEKLQCVIDRISVERIGEKGESII
EFEVPLQKS

Sequences:

>Translated_169_residues
MHTILVFLNNMSIDKIENIRQKHDPLFELIPPHITIVFAFKSNISNGELKSHILNLSRGIGKIEIEFANRITSVGNYLFL
EVERGKEQIAKLHDMLYTEPLRQFLKEDIPYIPHVTVGRKESAELAAEVAKDIHSFPEKLQCVIDRISVERIGEKGESII
EFEVPLQKS
>Mature_169_residues
MHTILVFLNNMSIDKIENIRQKHDPLFELIPPHITIVFAFKSNISNGELKSHILNLSRGIGKIEIEFANRITSVGNYLFL
EVERGKEQIAKLHDMLYTEPLRQFLKEDIPYIPHVTVGRKESAELAAEVAKDIHSFPEKLQCVIDRISVERIGEKGESII
EFEVPLQKS

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19388; Mature: 19388

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTILVFLNNMSIDKIENIRQKHDPLFELIPPHITIVFAFKSNISNGELKSHILNLSRGI
CCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
GKIEIEFANRITSVGNYLFLEVERGKEQIAKLHDMLYTEPLRQFLKEDIPYIPHVTVGRK
CEEEEHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ESAELAAEVAKDIHSFPEKLQCVIDRISVERIGEKGESIIEFEVPLQKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure
MHTILVFLNNMSIDKIENIRQKHDPLFELIPPHITIVFAFKSNISNGELKSHILNLSRGI
CCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
GKIEIEFANRITSVGNYLFLEVERGKEQIAKLHDMLYTEPLRQFLKEDIPYIPHVTVGRK
CEEEEHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ESAELAAEVAKDIHSFPEKLQCVIDRISVERIGEKGESIIEFEVPLQKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA