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The map label for this gene is des [H]

Identifier: 52142524

GI number: 52142524

Start: 2837482

End: 2838513

Strand: Reverse

Name: des [H]

Synonym: BCZK2718

Alternate gene names: 52142524

Gene position: 2838513-2837482 (Counterclockwise)

Preceding gene: 52142523

Following gene: 52142525

Centisome position: 53.55

GC content: 34.79

Gene sequence:

>1032_bases
ATGACATTAGAAAAAACTAAAAATTTAAAAAAACAAGTTGCCCCTTATGAAAAATCAACAATTAAAAAAAGTGTGTGGCA
ACTTATTAACACAGTCGTGCCGTTTATTATTTTATGGTACCTCGCTTATAAAAGTTTGTCCGTTTCTTATCTGTTAGCAG
TAGTTCCATCTCTGTTAGCTGCTGGTTTTATGACACGAATTTTCATTATTTTTCATGATTGTACCCATTATTCATTCTTT
AAAAGTCGACGTGCAAATAGAATAGTAGGGACATGTATGGGTGTGTTAACGTTATTCCCATTTGATCAATGGGGGCATGA
TCATGCGATTCATCACGCTACAAGTGGTAATTTAGATAAGAGAGGTACAGGAGACATTTGGACGCTTACAGTGGATGAAT
ATGTAGCTGCGCCATTTAGACTTCGTTTAGCATATCGTTTATATCGCAATCCATTTGTTATGTTTGGGTTAGGTCCGATT
TATGTATTTTTGCTTAAAAATAGATTTAACCGAAAAGGTGCAAGACAGAAAGAACGTATGAATACGTATTTGACGAATAT
TATAATTGTTGCCGTAGTAGCTATACTTTGCTGGGCAATAGGATGGCAATCATTCTTATTAGTACATGGTACGATATTCT
TAATTGCAGGTTCAGTAGGGATTTGGCTGTTTTACGTACAGCACACATTCGAGGATTCTTACTTTGAAGAAGATAAAGAT
TGGGAATATGTGAAAGCGGCTGTAGAGGGAAGTTCATTTTATAAACTTCCAAAAATCTTGCAATTCCTAACTGGTAATAT
TGGATTCCATCATGTTCACCATTTAAGTCCAAGAGTACCAAACTATAAACTAGAAGAGGCACACAATAATACGCTTCCGT
TAAAAAATGTACCAACGATTACACTTGCTACAAGCTTGCGTTCACTTCGTTTCCGTCTTTGGGATGAGAAAAGTAACAAT
TTTGTTAGCTTTAAAGAAGTCAAAAATATAATTAAAAATAATGTTTCTGTTCGGGTGAAATCGGAACTATAA

Upstream 100 bases:

>100_bases
TTATAGTATATAATAATATTATTACATCTACTTTTAACACCTGATACTAATAGTGTGCTATAATATGAATTAGCAACATA
AAGGAAGGGAATTAAAAAAA

Downstream 100 bases:

>100_bases
ATTCATCGGATATAAAACTCCCCTTAATTTATCGATGTAAGGGGAGTTTTTGTTATGTATAACTGATATCGGGGACGTGG
AAAAATACATGTGTAGGTAT

Product: delta5 acyl-lipid desaturase

Products: NA

Alternate protein names: Delta(5) acyl-lipid desaturase; Delta(5) desaturase [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTLEKTKNLKKQVAPYEKSTIKKSVWQLINTVVPFIILWYLAYKSLSVSYLLAVVPSLLAAGFMTRIFIIFHDCTHYSFF
KSRRANRIVGTCMGVLTLFPFDQWGHDHAIHHATSGNLDKRGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPI
YVFLLKNRFNRKGARQKERMNTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTITLATSLRSLRFRLWDEKSNN
FVSFKEVKNIIKNNVSVRVKSEL

Sequences:

>Translated_343_residues
MTLEKTKNLKKQVAPYEKSTIKKSVWQLINTVVPFIILWYLAYKSLSVSYLLAVVPSLLAAGFMTRIFIIFHDCTHYSFF
KSRRANRIVGTCMGVLTLFPFDQWGHDHAIHHATSGNLDKRGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPI
YVFLLKNRFNRKGARQKERMNTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTITLATSLRSLRFRLWDEKSNN
FVSFKEVKNIIKNNVSVRVKSEL
>Mature_342_residues
TLEKTKNLKKQVAPYEKSTIKKSVWQLINTVVPFIILWYLAYKSLSVSYLLAVVPSLLAAGFMTRIFIIFHDCTHYSFFK
SRRANRIVGTCMGVLTLFPFDQWGHDHAIHHATSGNLDKRGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPIY
VFLLKNRFNRKGARQKERMNTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKDW
EYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTITLATSLRSLRFRLWDEKSNNF
VSFKEVKNIIKNNVSVRVKSEL

Specific function: Catalyzes the introduction of a cis-double bond at the delta(5) position of existing saturated fatty acids attached to membrane phospholipids. It is not strictly specific for palmitic acid (C16) but can also accept C14 as well as C18 species to yield unsa

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 39733; Mature: 39602

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEKTKNLKKQVAPYEKSTIKKSVWQLINTVVPFIILWYLAYKSLSVSYLLAVVPSLLA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFMTRIFIIFHDCTHYSFFKSRRANRIVGTCMGVLTLFPFDQWGHDHAIHHATSGNLDK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCC
RGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPIYVFLLKNRFNRKGARQKERM
CCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHH
NTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTI
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCC
TLATSLRSLRFRLWDEKSNNFVSFKEVKNIIKNNVSVRVKSEL
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
TLEKTKNLKKQVAPYEKSTIKKSVWQLINTVVPFIILWYLAYKSLSVSYLLAVVPSLLA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9555904; 9384377 [H]