Click here to switch to the map view.

The map label for this gene is 52142508

Identifier: 52142508

GI number: 52142508

Start: 2850243

End: 2850650

Strand: Reverse

Name: 52142508

Synonym: BCZK2734

Alternate gene names: NA

Gene position: 2850650-2850243 (Counterclockwise)

Preceding gene: 52142504

Following gene: 52142511

Centisome position: 53.78

GC content: 36.27

Gene sequence:

>408_bases
TTGCGTATATTGGAATGTGAATATATAATATCGGTATACGATATATCGGTAGTCGATATATCATCAAACGATGTATCGGA
GGTAGTTATAATGAATGCGAAAGTGCAAAAATACATTCCGTTAACAGAAGCGACATATTACATACTGTTGTCATTAGTGA
AACCAATGCACGGATATGGAATTATGCAAATGGTAGAAGAGATGACAAATGGGGAAGTAAAACTCGGTCCTGGTACTTTA
TATGGCAATACGACGAAGTTACTAAAAGAAAAGTTAATAGTTGAAGTTGCCTCTACAGATAGAAAGAAGTGTTATGAGTT
AACACCACTTGGTAGAGAAGTGTTAGAGCTAGAGTATAACAGGTTGCAGAGGTCGGTAAGAAATGGGAATAGTATATTAG
GGGAGTGA

Upstream 100 bases:

>100_bases
TCAAAATATAAACGGATATTTCTATATTTTAACAAATTATTCAGAAAATTTATATGGTTTTTCAATTCAGATAAATGGAT
ATCTGATTATTAAAATATGC

Downstream 100 bases:

>100_bases
ATAGAAGATGAAGACAAAGAAGGTATTGAAATTTTTCGCGGCATGGAGTTTAGAAAAAGAAGAAGCCTTTTTACGGAAAA
TGCATCAAAAAGGATGGGCG

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family; Transcriptional Regulator PadR Family Protein; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; PadR Family Regulatory Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRILECEYIISVYDISVVDISSNDVSEVVIMNAKVQKYIPLTEATYYILLSLVKPMHGYGIMQMVEEMTNGEVKLGPGTL
YGNTTKLLKEKLIVEVASTDRKKCYELTPLGREVLELEYNRLQRSVRNGNSILGE

Sequences:

>Translated_135_residues
MRILECEYIISVYDISVVDISSNDVSEVVIMNAKVQKYIPLTEATYYILLSLVKPMHGYGIMQMVEEMTNGEVKLGPGTL
YGNTTKLLKEKLIVEVASTDRKKCYELTPLGREVLELEYNRLQRSVRNGNSILGE
>Mature_135_residues
MRILECEYIISVYDISVVDISSNDVSEVVIMNAKVQKYIPLTEATYYILLSLVKPMHGYGIMQMVEEMTNGEVKLGPGTL
YGNTTKLLKEKLIVEVASTDRKKCYELTPLGREVLELEYNRLQRSVRNGNSILGE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15310; Mature: 15310

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILECEYIISVYDISVVDISSNDVSEVVIMNAKVQKYIPLTEATYYILLSLVKPMHGYG
CCEEEHEEEEEEEEEEEEEECCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCH
IMQMVEEMTNGEVKLGPGTLYGNTTKLLKEKLIVEVASTDRKKCYELTPLGREVLELEYN
HHHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHHHHH
RLQRSVRNGNSILGE
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MRILECEYIISVYDISVVDISSNDVSEVVIMNAKVQKYIPLTEATYYILLSLVKPMHGYG
CCEEEHEEEEEEEEEEEEEECCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCH
IMQMVEEMTNGEVKLGPGTLYGNTTKLLKEKLIVEVASTDRKKCYELTPLGREVLELEYN
HHHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHHHHH
RLQRSVRNGNSILGE
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA