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The map label for this gene is ybgL [C]

Identifier: 52142434

GI number: 52142434

Start: 2923208

End: 2923969

Strand: Reverse

Name: ybgL [C]

Synonym: BCZK2808

Alternate gene names: 52142434

Gene position: 2923969-2923208 (Counterclockwise)

Preceding gene: 52142433

Following gene: 52142435

Centisome position: 55.16

GC content: 38.98

Gene sequence:

>762_bases
ATGACTACAATTGATTTGAATTGTGATTTAGGAGAAAGTTTTGGCGCTTATAAAATGGGGAATGATGATGAAATTCTTCC
GTTCGTTTCCTCTATAAACGTTGCATGTGGTTTTCATGCGGGTGATCCGTCCGTTATGCGGCAAACGGTTGAAAAGGCAA
TGCAGCATAACGTAGCGATAGGGGCACACCCAGGATTTCCTGATTTAATTGGATTTGGTAGAAGGAACATGAACGTTTCA
GCAAGTGAAGTATACGATTATGTTTTATATCAAATTGGTGCATTAGACACTTTTGTAAAAGCAGCTGGTGGGAAGATGCA
TCATGTAAAGCCGCACGGTGCCTTATATAATATGGCGGCAACTAATCCGGAAATTGCAGATGCAATTGCGAAGGCAATTT
ATCATAGTAATCCAAGTCTATTATTTTACGGATTAGCAAATAGCGAGGCGTTTATACAGGCTGCGGAAAAATATAATATA
ACTCTCGTACAAGAAGCTTTTGCAGATCGTACGTATAAGCAAGATGGAACGTTGACAAGTCGTACAGAAGAAAATGCGCT
TATAAAAAATGAAGAAGAAGCGATAAAGCAAGTGCTTCAAATGGTGAAAGAAGGCTATGTAAATTCGGTGAATGGTGAGA
AAGTAGCAGTTCAGGCGCAGACGATCTGTTTACATGGTGATGGAGAGAAAGCTGTACAATTTGCGAGAAGAATATACAGA
ACATTCGAAAATAATGAGATTTCTATATGCACACCGAAATAA

Upstream 100 bases:

>100_bases
GCTTGAAGAAGCGGAACAATTGTACATAGAAAAAGAAGTAAATATGAATCTATTAAAAAAGTTCATCGCTTTACGAAGCT
GAGTGCAGGAGGGAAATATC

Downstream 100 bases:

>100_bases
AATAATGAGGGGAAGTGTTGGAATTGGTGAAATTAATCGGGATATTACTTGTTGCAGGGGGCTTTTTATTTAGATTAAAT
ACACTATTAGTCGTTATGGT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ASEVYDYVLYQIGALDTFVKAAGGKMHHVKPHGALYNMAATNPEIADAIAKAIYHSNPSLLFYGLANSEAFIQAAEKYNI
TLVQEAFADRTYKQDGTLTSRTEENALIKNEEEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARRIYR
TFENNEISICTPK

Sequences:

>Translated_253_residues
MTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ASEVYDYVLYQIGALDTFVKAAGGKMHHVKPHGALYNMAATNPEIADAIAKAIYHSNPSLLFYGLANSEAFIQAAEKYNI
TLVQEAFADRTYKQDGTLTSRTEENALIKNEEEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARRIYR
TFENNEISICTPK
>Mature_252_residues
TTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGRRNMNVSA
SEVYDYVLYQIGALDTFVKAAGGKMHHVKPHGALYNMAATNPEIADAIAKAIYHSNPSLLFYGLANSEAFIQAAEKYNIT
LVQEAFADRTYKQDGTLTSRTEENALIKNEEEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARRIYRT
FENNEISICTPK

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=51.6260162601626, Blast_Score=262, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27777; Mature: 27645

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAI
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFPDLIGFGRRNMNVSASEVYDYVLYQIGALDTFVKAAGGKMHHVKPHGALYNMAA
ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECC
TNPEIADAIAKAIYHSNPSLLFYGLANSEAFIQAAEKYNITLVQEAFADRTYKQDGTLTS
CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCEEEEHHHHHCCCCCCCCCCCC
RTEENALIKNEEEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARRIYR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH
TFENNEISICTPK
HHCCCEEEEECCC
>Mature Secondary Structure 
TTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAI
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFPDLIGFGRRNMNVSASEVYDYVLYQIGALDTFVKAAGGKMHHVKPHGALYNMAA
ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECC
TNPEIADAIAKAIYHSNPSLLFYGLANSEAFIQAAEKYNITLVQEAFADRTYKQDGTLTS
CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCEEEEHHHHHCCCCCCCCCCCC
RTEENALIKNEEEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARRIYR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH
TFENNEISICTPK
HHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA