Click here to switch to the map view.

The map label for this gene is cotF [H]

Identifier: 52142412

GI number: 52142412

Start: 2946446

End: 2946928

Strand: Reverse

Name: cotF [H]

Synonym: BCZK2830

Alternate gene names: 52142412

Gene position: 2946928-2946446 (Counterclockwise)

Preceding gene: 52142409

Following gene: 52142413

Centisome position: 55.59

GC content: 34.16

Gene sequence:

>483_bases
ATGTCTTATCCTAATCAGTTAGCTTGGCATGAAACATTGGATTTACATGAATTAGTAGCATTCCAAGCGAACGGCTTAAT
CAAATTAAAAAAATCAGTTAGAAATGTACCTGATCAAGCACTTCAATCGTTATATATTAAAGCTATAAATGTCATCCAAA
ACAATCTGCAAGAGTTAGTACAGTTTTATCCGTATGCTCCTGGATTTCAATCGCAGCAGCATCGTGATGACACTGGATTT
TACGCTGGAGATTTACTTGGATTAGCAAAGACATCTGTTCGAAATTATGCAATTGCAATTACTGAAACTGCAACGCCTCG
TCTTAGAGAAGTTTTAACCCGTCAAATAAATGGTGCTATACAATTACATGCGCAGGTTTTTAACTTTATGTACGAACGTG
GTTACTATCCAGCTTACGATTTAAAACAACTATTAAAAAATGATATTCAAAATGTGCAAAAGGCAATACAAATGCAATAT
TAA

Upstream 100 bases:

>100_bases
ACGTAATCATGAATTAGATTGAAATGAATTCATGTAGTATAGGCCCTTTTTGAATTTTTTTGCATAATGTAGCATGAGTG
AATATTAAGGGGGAACATAC

Downstream 100 bases:

>100_bases
AATGAAGATATGGAAATTATCTTTAGAGGAAAACTATAGTTTATTTATAGGTCAATTAGTTAAGACTCAATGGTAATTTC
CATTGTTAATAAATTGATTA

Product: spore coat protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSYPNQLAWHETLDLHELVAFQANGLIKLKKSVRNVPDQALQSLYIKAINVIQNNLQELVQFYPYAPGFQSQQHRDDTGF
YAGDLLGLAKTSVRNYAIAITETATPRLREVLTRQINGAIQLHAQVFNFMYERGYYPAYDLKQLLKNDIQNVQKAIQMQY

Sequences:

>Translated_160_residues
MSYPNQLAWHETLDLHELVAFQANGLIKLKKSVRNVPDQALQSLYIKAINVIQNNLQELVQFYPYAPGFQSQQHRDDTGF
YAGDLLGLAKTSVRNYAIAITETATPRLREVLTRQINGAIQLHAQVFNFMYERGYYPAYDLKQLLKNDIQNVQKAIQMQY
>Mature_159_residues
SYPNQLAWHETLDLHELVAFQANGLIKLKKSVRNVPDQALQSLYIKAINVIQNNLQELVQFYPYAPGFQSQQHRDDTGFY
AGDLLGLAKTSVRNYAIAITETATPRLREVLTRQINGAIQLHAQVFNFMYERGYYPAYDLKQLLKNDIQNVQKAIQMQY

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016493
- InterPro:   IPR012851 [H]

Pfam domain/function: PF07875 Coat_F [H]

EC number: NA

Molecular weight: Translated: 18450; Mature: 18319

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPNQLAWHETLDLHELVAFQANGLIKLKKSVRNVPDQALQSLYIKAINVIQNNLQELV
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QFYPYAPGFQSQQHRDDTGFYAGDLLGLAKTSVRNYAIAITETATPRLREVLTRQINGAI
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH
QLHAQVFNFMYERGYYPAYDLKQLLKNDIQNVQKAIQMQY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYPNQLAWHETLDLHELVAFQANGLIKLKKSVRNVPDQALQSLYIKAINVIQNNLQELV
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QFYPYAPGFQSQQHRDDTGFYAGDLLGLAKTSVRNYAIAITETATPRLREVLTRQINGAI
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHH
QLHAQVFNFMYERGYYPAYDLKQLLKNDIQNVQKAIQMQY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1708381; 7584024; 9384377 [H]