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The map label for this gene is gerBB [H]

Identifier: 52142390

GI number: 52142390

Start: 2970215

End: 2971306

Strand: Reverse

Name: gerBB [H]

Synonym: BCZK2852

Alternate gene names: 52142390

Gene position: 2971306-2970215 (Counterclockwise)

Preceding gene: 52142389

Following gene: 52142391

Centisome position: 56.05

GC content: 33.42

Gene sequence:

>1092_bases
GTGATTACTATACCTAAAGATCGAATAACAACTTCACAAGCAGTTGTTATAATTGTAAATTACATACTTGGGACAGGAAT
TCTCACTTTGCCCAGAGCATCTGTGGAAAAAGTGAAAACACCAGATGTATGGTTAAGTGTGATATTAGGTGGGATACTCG
CAATGGTTTCAGGAGTAATTATGGTCAAATTAAGTCAGCAGTTTCCAGAAAAAACATTTTACCAATACAGTCAAGATATT
GTAGGGAAATGGATAGGCAGATTGCTTAGTTTTCTTATTATAGGGTATTTTCTTACGACTTCAGCATTTCAAATTCGTTC
AATGGCAGAAGTAATAAGCTTTTTTTTGCTCGAAGGAACCCCCACATGGGCTATTGTTATGCCTTTTATGTGGATAGGTC
TCTATTTGATTATGGGTGGTATTAATTCAATTGCACGGATGTTTGAAATAATATTTCCTATTACTGTTTTTATTTTTTTA
ATCATTTCCTTTATGAGTATCGGAATATTCGAGATAGATAATCTCCGTCCCGTATTAGGTTTGGGAATTAAACCAGTGTT
AGATGGGATAAAAACAACGTCTCTCGCATATACAGGTCCTGAAATTATGTTAATTCTTTTGGTATTTATGGAACAACGAA
AGAAAGCAGTAAAAGCTATTTTAGTTGGAATTTCTATTCCGTTAATCTTTTATGTAATAACTGTTGTAATGGTCATTGGT
GCATTATCAATTGATGGGGTTGTAACAAGAACATGGCCGACAATTGATCTTATGCGCAGTTTTGAAATTTCTGGTTTGAT
ATTTGAACGTTTTGAATCTTTACTGCTTGTAATATGGATTATGCAAATATTTGCTACATATACAATTAGTTACTATGCAG
CTGCATTAGGATTAGCGCAACTCTTTAAAAAGAGTATTCATCCGTTTATTTTTGCTTTGATTCCAATCATTTACATCATT
GCTATGACTTCGAAAAATATAAATGACTTGCTTAAATTGGGGGATATGCTCGGTAATGTTGCATTATTTTTATTTGGTTT
ACTACCACTGCTTCTTCTTATTATTACGCGATTAAAAGGAGGAGTAGTGTGA

Upstream 100 bases:

>100_bases
TTCGCATGCCATTAAAAATAATGAGACGTCGACCGAAAATAATGCATACCAAAAAAACTATCCGCAAAAGGTAGCTGATG
ACGAAAGGAAGTGGCCTTCA

Downstream 100 bases:

>100_bases
AACATAAATTTAATTATGTGCGGTTCTATTTGGCTTTGTTAGGGACGCTTTTGCTTCTATTTTTAACAGGATGTTGGAGC
AGTAAAGAAGTAGAAGAGTT

Product: spore germination protein; amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MITIPKDRITTSQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPEKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMGGINSIARMFEIIFPITVFIFL
IISFMSIGIFEIDNLRPVLGLGIKPVLDGIKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLIFYVITVVMVIG
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQLFKKSIHPFIFALIPIIYII
AMTSKNINDLLKLGDMLGNVALFLFGLLPLLLLIITRLKGGVV

Sequences:

>Translated_363_residues
MITIPKDRITTSQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPEKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMGGINSIARMFEIIFPITVFIFL
IISFMSIGIFEIDNLRPVLGLGIKPVLDGIKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLIFYVITVVMVIG
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQLFKKSIHPFIFALIPIIYII
AMTSKNINDLLKLGDMLGNVALFLFGLLPLLLLIITRLKGGVV
>Mature_363_residues
MITIPKDRITTSQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPEKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMGGINSIARMFEIIFPITVFIFL
IISFMSIGIFEIDNLRPVLGLGIKPVLDGIKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLIFYVITVVMVIG
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQLFKKSIHPFIFALIPIIYII
AMTSKNINDLLKLGDMLGNVALFLFGLLPLLLLIITRLKGGVV

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40481; Mature: 40481

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIPKDRITTSQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVI
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVKLSQQFPEKTFYQYSQDIVGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTWAIVMPFMWIGLYLIMGGINSIARMFEIIFPITVFIFLIISFMSIGIFEIDNLRPVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCHHHH
LGIKPVLDGIKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLIFYVITVVMVIG
CCCHHHHCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQ
HHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNVALFLFGLLPLLLLIITRLKG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVV
CCC
>Mature Secondary Structure
MITIPKDRITTSQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVI
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVKLSQQFPEKTFYQYSQDIVGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTWAIVMPFMWIGLYLIMGGINSIARMFEIIFPITVFIFLIISFMSIGIFEIDNLRPVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCHHHH
LGIKPVLDGIKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLIFYVITVVMVIG
CCCHHHHCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQ
HHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNVALFLFGLLPLLLLIITRLKG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]