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The map label for this gene is yrhP [H]

Identifier: 52142317

GI number: 52142317

Start: 3057582

End: 3058211

Strand: Reverse

Name: yrhP [H]

Synonym: BCZK2925

Alternate gene names: 52142317

Gene position: 3058211-3057582 (Counterclockwise)

Preceding gene: 52142315

Following gene: 52142318

Centisome position: 57.69

GC content: 31.43

Gene sequence:

>630_bases
ATGTACGGTATTATTAATTACGAAGTGTTTTTACTAACAGGGATTTTATTAAATCTAATTCCTGGTGCAGATACCATGTA
TATTGTGGGAAGAAGTATTTCACAAGGTAGAAAAGCAGGTGTGTATTCTGTTTTTGGTATTATTACTGGTTCTTTAGTTC
ATACGTTATTGGTTGCTTTTGGTTTATCTATTATACTTACAAAATCCGTTGTGTTATTTAACACCATTAAGGTTATAGGT
GTTATCTATCTTGTATATTTGGGAATGAAAATGATACTTGATAAGACAAATGTAGATTTTCAAGCCCCATCCAATAAATT
GAACATTAGAAAGATATATTTACAAGGACTCTTAACAAGTCTTACGAATCCAAAAGTCTCTTTATTCTTTATTGCGTTTC
TGCCGCAGTTTATAGATACAAAGGCTTCAGGTCCTATACCTTTTATCATTTTAGGAATTACTTTTACAGTAACTGGACTA
TTGTGGTGTTTATTTGTTGCTTATTTCTCTTCCTATGTCACCAAAAAATTAAGAGGAAATCAAAAGGTAGGAATGATTCT
AAATAAAGTAACAGGACTGATTTTTATTGGGATGGGGTTAAAGTTGCTTCAAACAAAGGCTCCTCAATAA

Upstream 100 bases:

>100_bases
AAATCACTGATTTTATTGAATAAATAGAAAACGCTTTTCTTTTTCTTTTATTTCATTTAATATCAATAAGGGCACCAAAA
AAATAGATAGGGGTGCTAGA

Downstream 100 bases:

>100_bases
ACATGAATAATAAAAAAATGCCCCCTTCAAGAGTTGTTATCTTTGCTTTAAGCTAATTTCTATATATTAAAAACCTCTTC
AAATTTGAAGGGGTTTTTTG

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MYGIINYEVFLLTGILLNLIPGADTMYIVGRSISQGRKAGVYSVFGIITGSLVHTLLVAFGLSIILTKSVVLFNTIKVIG
VIYLVYLGMKMILDKTNVDFQAPSNKLNIRKIYLQGLLTSLTNPKVSLFFIAFLPQFIDTKASGPIPFIILGITFTVTGL
LWCLFVAYFSSYVTKKLRGNQKVGMILNKVTGLIFIGMGLKLLQTKAPQ

Sequences:

>Translated_209_residues
MYGIINYEVFLLTGILLNLIPGADTMYIVGRSISQGRKAGVYSVFGIITGSLVHTLLVAFGLSIILTKSVVLFNTIKVIG
VIYLVYLGMKMILDKTNVDFQAPSNKLNIRKIYLQGLLTSLTNPKVSLFFIAFLPQFIDTKASGPIPFIILGITFTVTGL
LWCLFVAYFSSYVTKKLRGNQKVGMILNKVTGLIFIGMGLKLLQTKAPQ
>Mature_209_residues
MYGIINYEVFLLTGILLNLIPGADTMYIVGRSISQGRKAGVYSVFGIITGSLVHTLLVAFGLSIILTKSVVLFNTIKVIG
VIYLVYLGMKMILDKTNVDFQAPSNKLNIRKIYLQGLLTSLTNPKVSLFFIAFLPQFIDTKASGPIPFIILGITFTVTGL
LWCLFVAYFSSYVTKKLRGNQKVGMILNKVTGLIFIGMGLKLLQTKAPQ

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=203, Percent_Identity=31.5270935960591, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI48994979, Length=200, Percent_Identity=28, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI48994978, Length=190, Percent_Identity=28.4210526315789, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22995; Mature: 22995

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGIINYEVFLLTGILLNLIPGADTMYIVGRSISQGRKAGVYSVFGIITGSLVHTLLVAF
CCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GLSIILTKSVVLFNTIKVIGVIYLVYLGMKMILDKTNVDFQAPSNKLNIRKIYLQGLLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
LTNPKVSLFFIAFLPQFIDTKASGPIPFIILGITFTVTGLLWCLFVAYFSSYVTKKLRGN
HCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QKVGMILNKVTGLIFIGMGLKLLQTKAPQ
CHHHHHHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure
MYGIINYEVFLLTGILLNLIPGADTMYIVGRSISQGRKAGVYSVFGIITGSLVHTLLVAF
CCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GLSIILTKSVVLFNTIKVIGVIYLVYLGMKMILDKTNVDFQAPSNKLNIRKIYLQGLLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
LTNPKVSLFFIAFLPQFIDTKASGPIPFIILGITFTVTGLLWCLFVAYFSSYVTKKLRGN
HCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QKVGMILNKVTGLIFIGMGLKLLQTKAPQ
CHHHHHHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]