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The map label for this gene is pbp [H]

Identifier: 52142311

GI number: 52142311

Start: 3065028

End: 3066569

Strand: Reverse

Name: pbp [H]

Synonym: BCZK2932

Alternate gene names: 52142311

Gene position: 3066569-3065028 (Counterclockwise)

Preceding gene: 52142312

Following gene: 52142310

Centisome position: 57.85

GC content: 35.02

Gene sequence:

>1542_bases
ATGAAGAATAGACAAAAAGCGTCGATAATATGTAAAGGTATTTTATGTTTAATTATTTGTATGCTAATTACAAATGAAGT
GTGGTTTATGAAAGTAGCGAGGGCAGAATCGGGTACATTGACTGATAGGAATATAGAAAACTTTAAAAAAAAGCTGGATG
AACAGGTACCAAAATGGCAGGAGAATTATGAGGTACCAGGGGTTGCAATCGGGATTGTACATGAGGGGCGTATTGCTTAT
ACACTTAACTACGGTTATGTAGATAAAAAGACAAAAAAAGCGGTGAGTGATGATACTTTGTTTCAGGCTGGTTCCATATC
TAAAAGTCTTACAGCGTGGGGAATCTTGCACCTTGTAGATGAAGGGCGTTTATTACTAGATGATCCCGTTGGAAAATATC
TGACCAAATGGAAATTACCTAATTCAGAGTTTAATAATAATGAAGTAACCATAAGAAGATTGTTAAGTCATACAGCAGGG
CTATCTGCACATAAAGGATACCTCGGGGTTGCACCAGGGAAACATCTTGACTCTATTGAGGAGTCTCTGTCTGGAAAAGG
ATGGCTTAATGAAGCAGTGGAGGTTACCAATAAACCAGGTTCAGAAACAATTTACTCTGGTGGCGGATATACAATTTTAC
AACTTGTAATTGAAGAGGTTACCGGAATACCGTTTGATCGTTATATGGAAGAACAAATCATGAAGCCTTTAGGAATGAAA
TCTAGTTCATTTTTACAACGTCCTGAAAACCATAACCTTTCAAAAGCTTATGGATATTTTGGAGAGGAGCTCCCTAGTTA
CCAATTTACCGAACAGGCTGCTGCAGGTTTTAAGACAAATGTTATCGATATGATGACATTGATACTTGCAAGCATGGATG
CAAATAATAAAGGGAATGGTGTCATCAAAAGTGAACGTGTTGAGGAAATGCAAAAGCCAGTATTAGGGGAGAACGGTTTA
GGTATATTTGAAAAAAAACTATCTAATCAATGGAAATTACTTTATCATTCTGGTGACAATCGAGGCTGGCATTCTTTTTA
TGGTTTTATTCCTAATACAAAGGATGGATTGGTAATCCTTACAAATGGTGAAGGTGGTATAGACTTACGACAGGATATTT
ACCACGCATGGATTGAATATGAAACGGGAAAATTACCTGAAAGTTACTTTTCTCTAGCAGAGCAGAGAAAAACTAACTTC
ATTACATCAATTGTTATTGGCGCCACACTTAGTATATATTTGCTACTATTTGTGATTAGATTGTACAAAGGTAGAAGAAC
TTTCATTTTTAAGCAAGAGAAGAAATCTTACATCGGATTAGTAGTTAGGACATTTTTACTTGTTGTTACTGCTGTTCTCA
TTTTTTGTGCTGCTTATTTGTGGAGAGTTTTTAGTTTGAATTCCGGTAATACAATAAATTTCATTCTAATAATGGCATGG
ATTATAACGCTATTAATTAGTGGATTTTTCCCGAAAATTAAAAGTAATAAAAAACAACGTATGAAACGAAAAAAATTAAC
ATCAAAATTTACATGTATGTAA

Upstream 100 bases:

>100_bases
AATTTTGTAAGGTTAAGTAATAAAAATCGATAGAACTAGATAAATGAATGGGATATTCTGAGTGTCGGAAAGAATATTCT
GAAAAAAAGGGGTAGGACAA

Downstream 100 bases:

>100_bases
TGTTAAAGGCTAGAAAGCTAGATTGGCGTGAATCATTAATTGTGGAGTGCAAAAAACAACAAAATCTTTTAAAAAACACT
TAATTTTTTACTCCATCTAT

Product: penicillin-binding protein

Products: NA

Alternate protein names: FmtA-like protein [H]

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MKNRQKASIICKGILCLIICMLITNEVWFMKVARAESGTLTDRNIENFKKKLDEQVPKWQENYEVPGVAIGIVHEGRIAY
TLNYGYVDKKTKKAVSDDTLFQAGSISKSLTAWGILHLVDEGRLLLDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAG
LSAHKGYLGVAPGKHLDSIEESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGFKTNVIDMMTLILASMDANNKGNGVIKSERVEEMQKPVLGENGL
GIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVILTNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNF
ITSIVIGATLSIYLLLFVIRLYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM

Sequences:

>Translated_513_residues
MKNRQKASIICKGILCLIICMLITNEVWFMKVARAESGTLTDRNIENFKKKLDEQVPKWQENYEVPGVAIGIVHEGRIAY
TLNYGYVDKKTKKAVSDDTLFQAGSISKSLTAWGILHLVDEGRLLLDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAG
LSAHKGYLGVAPGKHLDSIEESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGFKTNVIDMMTLILASMDANNKGNGVIKSERVEEMQKPVLGENGL
GIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVILTNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNF
ITSIVIGATLSIYLLLFVIRLYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM
>Mature_513_residues
MKNRQKASIICKGILCLIICMLITNEVWFMKVARAESGTLTDRNIENFKKKLDEQVPKWQENYEVPGVAIGIVHEGRIAY
TLNYGYVDKKTKKAVSDDTLFQAGSISKSLTAWGILHLVDEGRLLLDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAG
LSAHKGYLGVAPGKHLDSIEESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGFKTNVIDMMTLILASMDANNKGNGVIKSERVEEMQKPVLGENGL
GIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVILTNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNF
ITSIVIGATLSIYLLLFVIRLYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM

Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=231, Percent_Identity=29.8701298701299, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1790593, Length=248, Percent_Identity=25, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533026, Length=384, Percent_Identity=26.0416666666667, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17550934, Length=200, Percent_Identity=29, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983666, Length=176, Percent_Identity=32.9545454545455, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983659, Length=188, Percent_Identity=32.4468085106383, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 58083; Mature: 58083

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRQKASIICKGILCLIICMLITNEVWFMKVARAESGTLTDRNIENFKKKLDEQVPKWQ
CCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHH
ENYEVPGVAIGIVHEGRIAYTLNYGYVDKKTKKAVSDDTLFQAGSISKSLTAWGILHLVD
HCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHC
EGRLLLDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAGLSAHKGYLGVAPGKHLDSIE
CCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHH
ESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
HHHCCCCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGFKTNVIDMMTLILASMDANNKGNG
CHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
VIKSERVEEMQKPVLGENGLGIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVIL
CCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCCCCEEEE
TNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNFITSIVIGATLSIYLLLFVIR
ECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
HHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM
HHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNRQKASIICKGILCLIICMLITNEVWFMKVARAESGTLTDRNIENFKKKLDEQVPKWQ
CCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHH
ENYEVPGVAIGIVHEGRIAYTLNYGYVDKKTKKAVSDDTLFQAGSISKSLTAWGILHLVD
HCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHC
EGRLLLDDPVGKYLTKWKLPNSEFNNNEVTIRRLLSHTAGLSAHKGYLGVAPGKHLDSIE
CCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHH
ESLSGKGWLNEAVEVTNKPGSETIYSGGGYTILQLVIEEVTGIPFDRYMEEQIMKPLGMK
HHHCCCCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
SSSFLQRPENHNLSKAYGYFGEELPSYQFTEQAAAGFKTNVIDMMTLILASMDANNKGNG
CHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
VIKSERVEEMQKPVLGENGLGIFEKKLSNQWKLLYHSGDNRGWHSFYGFIPNTKDGLVIL
CCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCCCCEEEE
TNGEGGIDLRQDIYHAWIEYETGKLPESYFSLAEQRKTNFITSIVIGATLSIYLLLFVIR
ECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYKGRRTFIFKQEKKSYIGLVVRTFLLVVTAVLIFCAAYLWRVFSLNSGNTINFILIMAW
HHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IITLLISGFFPKIKSNKKQRMKRKKLTSKFTCM
HHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA