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The map label for this gene is ygaY [H]

Identifier: 52142256

GI number: 52142256

Start: 3116933

End: 3118177

Strand: Direct

Name: ygaY [H]

Synonym: BCZK2986

Alternate gene names: 52142256

Gene position: 3116933-3118177 (Clockwise)

Preceding gene: 52142258

Following gene: 52142255

Centisome position: 58.8

GC content: 36.71

Gene sequence:

>1245_bases
ATGAATAGTAAAGAAAAAATGATGACCATTCTAAAACATACTCATATACATTCATCTGTTCATGCAACCATATCTCGTTA
TATGACTCTATTATTCGCAATAGCTTGCGGGATGGCTGTGGCAAACATATACTTCGCTCATCCACTACTTGATTCATTGT
CAAATGAATTTAAGATTCGTCATTCAACTATCGGTATCGTAATTACTATTACTCAAGTTTGTTATGCACTCGGTTTACTT
TTATTAGTTCCACTCGGTGATTTATTAAACCAAAAGAAAATAATCATTGTCCAAATGCTTTTATCTGTTTTTGCTTTAAT
TATAATTGGGTGCGCTCCCTCAAGCACCGTACTTTTTATAGGTATGGCCTTAGTAGGAGTTCTTGCAACTGTTACGCAAA
CACTTGTCGCATATGCATCAATTTTAGCTAATCCAGCTGAACGTGGGCGCATAGTAGGTTTCGTTACAAGTGGCGTTGTA
ATAGGTATTCTCCTTGCTCGTACATTTGCAGGCACTTTAACAGATTTAGCTGGATGGCGATCTGTTTATCTCACCTCCGC
TATTCTTTTACTCTTCGTAACTGTTTTGTTACACAAAAATTTACCTACTCTTGAACATAAAAAAGTGACCACTATGTCTT
ACCGAAAATTAATACACTCTGTTCTCTTATTATTTGTAGAAGAACGACTTTTACGCGTTCGCGGAATATTAGCATTGCTT
ATTTTCACTTCATTCAGTATTTTATGGACTTCTTTAGTATTGCCGCTAAGTGTTACACCACATAATCTTTCGCATACAGC
TATTGGCGCATTCGGCCTTGCTGGAGTTGCAGGTGCATTAGCTGCTACTAAAGCTGGACAATTAGCTGATAAAGGATTCG
GACAAAGAACAACTGGCATAGCCTTATCATTATTGGTACTTTCATGGCTCCTAATTAAATTTATAAATCACTCTCTATTA
TTACTAATTTTCGGCATTATCCTTTTAGATTTAGCGGTGCAAGCTGTACATGTCACCAATCAAAGTATGCTTTTCACAGT
GCGTCCTGAAGCGAGAAGTCGACTCACTGCCAGTTACATGATTTTTTACTCTATCGGTAGTGCAACTGGTGCCATTCTTT
CAACAAATACGTATGCAAAATATGGTTGGGATGGCGTATGTATATTAGGTGTATCTGTTAGTGCTTGTGCTCTTTTATTT
TGGACAATGACTTTAAGACAATCATCAAAACTAAAAGAAGAATAA

Upstream 100 bases:

>100_bases
ATAAACTTGACATATAGGTTTCTACAAGATTATATTTTACTTACGAAATAACATACCGTCCGGTACGTTATTTTTAACAA
TACAAAAAGGAGCTGATTTT

Downstream 100 bases:

>100_bases
TTCATTTGTGTATTTATTAATACGTGTTTTGCTACAAGACTATAGAATAACATTTACTGTGTAACACAAATCAACGGCAT
TTTCATATAAAAAATGCCGT

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNSKEKMMTILKHTHIHSSVHATISRYMTLLFAIACGMAVANIYFAHPLLDSLSNEFKIRHSTIGIVITITQVCYALGLL
LLVPLGDLLNQKKIIIVQMLLSVFALIIIGCAPSSTVLFIGMALVGVLATVTQTLVAYASILANPAERGRIVGFVTSGVV
IGILLARTFAGTLTDLAGWRSVYLTSAILLLFVTVLLHKNLPTLEHKKVTTMSYRKLIHSVLLLFVEERLLRVRGILALL
IFTSFSILWTSLVLPLSVTPHNLSHTAIGAFGLAGVAGALAATKAGQLADKGFGQRTTGIALSLLVLSWLLIKFINHSLL
LLIFGIILLDLAVQAVHVTNQSMLFTVRPEARSRLTASYMIFYSIGSATGAILSTNTYAKYGWDGVCILGVSVSACALLF
WTMTLRQSSKLKEE

Sequences:

>Translated_414_residues
MNSKEKMMTILKHTHIHSSVHATISRYMTLLFAIACGMAVANIYFAHPLLDSLSNEFKIRHSTIGIVITITQVCYALGLL
LLVPLGDLLNQKKIIIVQMLLSVFALIIIGCAPSSTVLFIGMALVGVLATVTQTLVAYASILANPAERGRIVGFVTSGVV
IGILLARTFAGTLTDLAGWRSVYLTSAILLLFVTVLLHKNLPTLEHKKVTTMSYRKLIHSVLLLFVEERLLRVRGILALL
IFTSFSILWTSLVLPLSVTPHNLSHTAIGAFGLAGVAGALAATKAGQLADKGFGQRTTGIALSLLVLSWLLIKFINHSLL
LLIFGIILLDLAVQAVHVTNQSMLFTVRPEARSRLTASYMIFYSIGSATGAILSTNTYAKYGWDGVCILGVSVSACALLF
WTMTLRQSSKLKEE
>Mature_414_residues
MNSKEKMMTILKHTHIHSSVHATISRYMTLLFAIACGMAVANIYFAHPLLDSLSNEFKIRHSTIGIVITITQVCYALGLL
LLVPLGDLLNQKKIIIVQMLLSVFALIIIGCAPSSTVLFIGMALVGVLATVTQTLVAYASILANPAERGRIVGFVTSGVV
IGILLARTFAGTLTDLAGWRSVYLTSAILLLFVTVLLHKNLPTLEHKKVTTMSYRKLIHSVLLLFVEERLLRVRGILALL
IFTSFSILWTSLVLPLSVTPHNLSHTAIGAFGLAGVAGALAATKAGQLADKGFGQRTTGIALSLLVLSWLLIKFINHSLL
LLIFGIILLDLAVQAVHVTNQSMLFTVRPEARSRLTASYMIFYSIGSATGAILSTNTYAKYGWDGVCILGVSVSACALLF
WTMTLRQSSKLKEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=366, Percent_Identity=25.6830601092896, Blast_Score=95, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44863; Mature: 44863

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKEKMMTILKHTHIHSSVHATISRYMTLLFAIACGMAVANIYFAHPLLDSLSNEFKIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEE
HSTIGIVITITQVCYALGLLLLVPLGDLLNQKKIIIVQMLLSVFALIIIGCAPSSTVLFI
ECHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GMALVGVLATVTQTLVAYASILANPAERGRIVGFVTSGVVIGILLARTFAGTLTDLAGWR
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYLTSAILLLFVTVLLHKNLPTLEHKKVTTMSYRKLIHSVLLLFVEERLLRVRGILALL
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFTSFSILWTSLVLPLSVTPHNLSHTAIGAFGLAGVAGALAATKAGQLADKGFGQRTTGI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHH
ALSLLVLSWLLIKFINHSLLLLIFGIILLDLAVQAVHVTNQSMLFTVRPEARSRLTASYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
IFYSIGSATGAILSTNTYAKYGWDGVCILGVSVSACALLFWTMTLRQSSKLKEE
EEEECCCCCCCEEECCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSKEKMMTILKHTHIHSSVHATISRYMTLLFAIACGMAVANIYFAHPLLDSLSNEFKIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEE
HSTIGIVITITQVCYALGLLLLVPLGDLLNQKKIIIVQMLLSVFALIIIGCAPSSTVLFI
ECHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GMALVGVLATVTQTLVAYASILANPAERGRIVGFVTSGVVIGILLARTFAGTLTDLAGWR
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYLTSAILLLFVTVLLHKNLPTLEHKKVTTMSYRKLIHSVLLLFVEERLLRVRGILALL
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFTSFSILWTSLVLPLSVTPHNLSHTAIGAFGLAGVAGALAATKAGQLADKGFGQRTTGI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHH
ALSLLVLSWLLIKFINHSLLLLIFGIILLDLAVQAVHVTNQSMLFTVRPEARSRLTASYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
IFYSIGSATGAILSTNTYAKYGWDGVCILGVSVSACALLFWTMTLRQSSKLKEE
EEEECCCCCCCEEECCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]