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The map label for this gene is mta [H]

Identifier: 52142227

GI number: 52142227

Start: 3146192

End: 3146950

Strand: Direct

Name: mta [H]

Synonym: BCZK3016

Alternate gene names: 52142227

Gene position: 3146192-3146950 (Clockwise)

Preceding gene: 52142230

Following gene: 52142225

Centisome position: 59.35

GC content: 33.73

Gene sequence:

>759_bases
TTGATACACATTAATAAAGTTGCAGAAATGACAGGCGTTACAGTAAGGACACTGCGTTATTACGATAAAATCGGATTATT
AAAACCAGCATCCAAAACAGAGGGTGGCCATCGTTTATATACAAATGAAGAAATAAAAAAACTTCAGCACGTTCAATTTT
TAAAAAAGGTTGGCTTTCCGTTACAAGAGATTAAACATATGCTCGGCTTCAATGAGTGGGATTGGTCGGATAGTTTAAAG
AGCCAATTATCTTATGTAATAAATGAGCAGGAAAATTTAAAGAAAATAGAATTATCCTTACGGGAAATGATAAATGGAAT
TGCGATAGAAGGAGAAGAAAGCTGGATCGCGATTCAAAAAATCATGCAATTATCCAGCAAAGATAAAGAAATCCAACAAT
ATTATCGCGAATCTATATTTAAAGAAAAAGAAATAAAACTATTAGAAAAGGTTCCTAAGATGGCAAGTGACTGTTCTGAT
TCACTCGAATGGATTGCTCTCATAGGTCAGTTAAAGCGTTATATGAAGGATGGACCAAAAGCAACGAACGTTCAAAATAT
CATAAGAAGAATGGAGGAAAAACGCTTAGAAGAATTTGAAGGTGAGGATGAATTTTTAAATAAGCTTTGGGAGATACGGA
TGTCTCCAAAACAATCAGAGAAGCTAAGTTTATATCCAATTGATCAAGATGTGCTTCAGTTTATAAACGAGGCATATGCC
ATTTTTATGGCTGAAAAGAATAATTCTAAGCCGAAATAA

Upstream 100 bases:

>100_bases
TACTTACTTAAAAATCTTTTTAGTAAAGAAGAATAGATGTGAAATAAGAAAATAATCGTTAAAGATAAAACCTTAACGTA
TAGAAAGGTAGGTTTATTAG

Downstream 100 bases:

>100_bases
GGGGGCACGAGCGATGGGTACAGAACAACTTCTCCTAATAGGCGGATTGGCTATATTGGACACGCTAAGTCCTACTACAA
TAGGAGTAACAATATATCTA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Multidrug transporter activation protein [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIHINKVAEMTGVTVRTLRYYDKIGLLKPASKTEGGHRLYTNEEIKKLQHVQFLKKVGFPLQEIKHMLGFNEWDWSDSLK
SQLSYVINEQENLKKIELSLREMINGIAIEGEESWIAIQKIMQLSSKDKEIQQYYRESIFKEKEIKLLEKVPKMASDCSD
SLEWIALIGQLKRYMKDGPKATNVQNIIRRMEEKRLEEFEGEDEFLNKLWEIRMSPKQSEKLSLYPIDQDVLQFINEAYA
IFMAEKNNSKPK

Sequences:

>Translated_252_residues
MIHINKVAEMTGVTVRTLRYYDKIGLLKPASKTEGGHRLYTNEEIKKLQHVQFLKKVGFPLQEIKHMLGFNEWDWSDSLK
SQLSYVINEQENLKKIELSLREMINGIAIEGEESWIAIQKIMQLSSKDKEIQQYYRESIFKEKEIKLLEKVPKMASDCSD
SLEWIALIGQLKRYMKDGPKATNVQNIIRRMEEKRLEEFEGEDEFLNKLWEIRMSPKQSEKLSLYPIDQDVLQFINEAYA
IFMAEKNNSKPK
>Mature_252_residues
MIHINKVAEMTGVTVRTLRYYDKIGLLKPASKTEGGHRLYTNEEIKKLQHVQFLKKVGFPLQEIKHMLGFNEWDWSDSLK
SQLSYVINEQENLKKIELSLREMINGIAIEGEESWIAIQKIMQLSSKDKEIQQYYRESIFKEKEIKLLEKVPKMASDCSD
SLEWIALIGQLKRYMKDGPKATNVQNIIRRMEEKRLEEFEGEDEFLNKLWEIRMSPKQSEKLSLYPIDQDVLQFINEAYA
IFMAEKNNSKPK

Specific function: Global transcriptional regulator that activates transcription of bmr and blt by binding directly to their promoter. Stimulates also the expression of the mta gene itself, ydfK and ymfE [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 29696; Mature: 29696

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHINKVAEMTGVTVRTLRYYDKIGLLKPASKTEGGHRLYTNEEIKKLQHVQFLKKVGFP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
LQEIKHMLGFNEWDWSDSLKSQLSYVINEQENLKKIELSLREMINGIAIEGEESWIAIQK
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHH
IMQLSSKDKEIQQYYRESIFKEKEIKLLEKVPKMASDCSDSLEWIALIGQLKRYMKDGPK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATNVQNIIRRMEEKRLEEFEGEDEFLNKLWEIRMSPKQSEKLSLYPIDQDVLQFINEAYA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
IFMAEKNNSKPK
EEEEECCCCCCC
>Mature Secondary Structure
MIHINKVAEMTGVTVRTLRYYDKIGLLKPASKTEGGHRLYTNEEIKKLQHVQFLKKVGFP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
LQEIKHMLGFNEWDWSDSLKSQLSYVINEQENLKKIELSLREMINGIAIEGEESWIAIQK
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHH
IMQLSSKDKEIQQYYRESIFKEKEIKLLEKVPKMASDCSDSLEWIALIGQLKRYMKDGPK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATNVQNIIRRMEEKRLEEFEGEDEFLNKLWEIRMSPKQSEKLSLYPIDQDVLQFINEAYA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
IFMAEKNNSKPK
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]