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The map label for this gene is 52142204

Identifier: 52142204

GI number: 52142204

Start: 3167681

End: 3167884

Strand: Direct

Name: 52142204

Synonym: BCZK3037

Alternate gene names: NA

Gene position: 3167681-3167884 (Clockwise)

Preceding gene: 52142207

Following gene: 52142197

Centisome position: 59.76

GC content: 38.24

Gene sequence:

>204_bases
ATGGCGTTCGTAACGAAAATAAAAGAATACCGCACCAAATTGAACATGACGCAAGAAGATTTAGCGAAACAAGTTAGTGT
ACGTCGTGAAACAATTAGCCATCTCGAAAAAGGTAAATACAATCCTTCCTTGCAGCTTGCTCACGATATTGCGAGGGCAC
TTCATAGTACGATTGATGAGGTTTTTATTTTTGAGGATGAATAA

Upstream 100 bases:

>100_bases
AAGAAATTGATATCGCTCTTATTTTCGGCACACTTATTCTTACGTTCGGATTCTCTATGTTCTTTTACGATAAACCAGTT
GATGAAATGGAAGATGCACC

Downstream 100 bases:

>100_bases
AAAATACCGGCATTCTTTTCACAAAGAATACCGGTATTTTTCATTTATACAACGATCATCCATACAAAACCGCATGAAAT
ACGCCTAACAGTAAGTATTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAFVTKIKEYRTKLNMTQEDLAKQVSVRRETISHLEKGKYNPSLQLAHDIARALHSTIDEVFIFEDE

Sequences:

>Translated_67_residues
MAFVTKIKEYRTKLNMTQEDLAKQVSVRRETISHLEKGKYNPSLQLAHDIARALHSTIDEVFIFEDE
>Mature_66_residues
AFVTKIKEYRTKLNMTQEDLAKQVSVRRETISHLEKGKYNPSLQLAHDIARALHSTIDEVFIFEDE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7835; Mature: 7704

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVTKIKEYRTKLNMTQEDLAKQVSVRRETISHLEKGKYNPSLQLAHDIARALHSTIDE
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VFIFEDE
HHCCCCC
>Mature Secondary Structure 
AFVTKIKEYRTKLNMTQEDLAKQVSVRRETISHLEKGKYNPSLQLAHDIARALHSTIDE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VFIFEDE
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]