Click here to switch to the map view.

The map label for this gene is 52142165

Identifier: 52142165

GI number: 52142165

Start: 3201397

End: 3201747

Strand: Reverse

Name: 52142165

Synonym: BCZK3074

Alternate gene names: NA

Gene position: 3201747-3201397 (Counterclockwise)

Preceding gene: 52142167

Following gene: 52142169

Centisome position: 60.4

GC content: 34.76

Gene sequence:

>351_bases
ATGAAATATATCGTTATAAAATCACATGTTAGCAATTATCCTCATCCAATTCGTTTAGAAGAGGGGGATGTAGTGAAAAT
GATAGAGAGTTACGCTGGTCCTGAAAATTGGGAAAACTGGATGTTTTGTCACGAAGAGAAATATGACCGGAAAGGATGGG
TTCCGGAGCAAATTATAAGAAAAGATATGAATGGAACAGGAATTATTATAAAACAATATACTGCGAAAGAATTAAATGTG
AGTATTGGAGAAAGAGTGATTGGATTAGAAGAATTAAATGGATGGATTTGGTGTGAAAAAACAGGTGGTGAGGATGGCTG
GGTACCAAAGGAAAACTTACAAAAATATTAG

Upstream 100 bases:

>100_bases
GGTTGATCGTTTTCGAATGAAGTGTTGTAGTACATGTGTATTCCTCCTTCTTAAGTTATAATGATATTATAACTTAATTT
TCTGATTGTTGGAGGTTGTT

Downstream 100 bases:

>100_bases
TAATACGATTTGGTTATTAATATAGGAAACATATTTTTGATTTATGAGTATATTGGTTGTAGGGTGAAAAATAGATTAAT
AGAGAAAGAGGAGATTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: SH3 Domain Protein; Variant SH3 Domain-Containing Protein

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKYIVIKSHVSNYPHPIRLEEGDVVKMIESYAGPENWENWMFCHEEKYDRKGWVPEQIIRKDMNGTGIIIKQYTAKELNV
SIGERVIGLEELNGWIWCEKTGGEDGWVPKENLQKY

Sequences:

>Translated_116_residues
MKYIVIKSHVSNYPHPIRLEEGDVVKMIESYAGPENWENWMFCHEEKYDRKGWVPEQIIRKDMNGTGIIIKQYTAKELNV
SIGERVIGLEELNGWIWCEKTGGEDGWVPKENLQKY
>Mature_116_residues
MKYIVIKSHVSNYPHPIRLEEGDVVKMIESYAGPENWENWMFCHEEKYDRKGWVPEQIIRKDMNGTGIIIKQYTAKELNV
SIGERVIGLEELNGWIWCEKTGGEDGWVPKENLQKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13643; Mature: 13643

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIVIKSHVSNYPHPIRLEEGDVVKMIESYAGPENWENWMFCHEEKYDRKGWVPEQIIR
CEEEEEECCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHH
KDMNGTGIIIKQYTAKELNVSIGERVIGLEELNGWIWCEKTGGEDGWVPKENLQKY
CCCCCCEEEEEECCCCCCCCCCCCEEECHHHCCCEEEEECCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MKYIVIKSHVSNYPHPIRLEEGDVVKMIESYAGPENWENWMFCHEEKYDRKGWVPEQIIR
CEEEEEECCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHH
KDMNGTGIIIKQYTAKELNVSIGERVIGLEELNGWIWCEKTGGEDGWVPKENLQKY
CCCCCCEEEEEECCCCCCCCCCCCEEECHHHCCCEEEEECCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA