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The map label for this gene is intR [C]

Identifier: 52141786

GI number: 52141786

Start: 3585029

End: 3586174

Strand: Direct

Name: intR [C]

Synonym: BCZK3461

Alternate gene names: 52141786

Gene position: 3585029-3586174 (Clockwise)

Preceding gene: 52141785

Following gene: 52141779

Centisome position: 67.63

GC content: 31.94

Gene sequence:

>1146_bases
ATGGCTAGCTTCAGAAAATTCGGAGATGTTTGGGAATTCCGAGTAAGATTTAAAGACCCTTATACTCAAAAATACAAAGA
GAAATCAAAACGTGGATTCAAGACAAAAAAAGAAGCACAACTTGCGGCTGCTGAAGAAGAAAAGAAATTATTAAACGGTT
TAGAAGTTGAGATTACTCCTACTTCTTTAAAACATTACCTTAGAGACTGGTTAAAATTATTTAAGCAAGACAATGTAAGA
AAAAACACCTTTATCTTGCATGAACGTAACATCGAAAAGCATATCATCCCCTACTTTCAAAACATGAACATAAAAGAACT
CAAACCAATGATGTATCAAAAATTTATTAATTCCTTAACTGATCAGGGTTACAGTAAGCGAACTGTTCAAATTATCCATG
GCACAATGAACAATGCCATGAAAAAAGCTGTTAGCTTAAAAAAAATCGAAAATAACCCTTGTGAAGAAGTAGTTATTTCA
AATAAGAACAATAAAGAAAGAGAAGGGCTAAAATATATGCGAAGTGAAGACATTCCCCTTTTCTTAAAGACTTCTTATCA
ATACAACTATATTTATTACATCTTTTTCAAAGCGCTTCTGAATACAGGTATGCGTAAAGGTGAAGCTGCTGCTTTACAAT
GGAAAGACATAAATTTAAAAGAACATACTATTACTATTTCTAAAACATTGGATTTTACAGCTAAAACAAAAGAAGAATTA
TTTGGAGATACAAAAACATTTACTTCTAAACGTACAATCATGATTCCTAAATCATTAGTCGATGAACTGCTGGCACATAA
AAAATGGCAAAATGCTAATAAGCTTGTTTTACAAGATGCGTATGAACATGAATTAGATTTAGTCTTTTCAAGAGTAGATG
GAAAGTTCTTACCGAAGTCAACATTGTTCAATGCATTCTCACGCATACTGAAGAAAGCAAATTTACCTAGATTAGAAATA
CATTCATTACGACACACCCACGCGGTTCTTTTATTAGAGTCTGGTGCAAGTATGAAATACATTCAAGATCGACTAGGACA
TAAGAGTATAGAAATCACTTCTAACGTTTATTCTCATATTAGCGACAAAATTAATAAGGATTCTATTTCGGGGTTTGAAG
CTTATATGAATAATGTATTGGGGTAA

Upstream 100 bases:

>100_bases
AAATAAAATATGAAGTTTCAGGTTATAAAGAGACTCCTGTGAAGTGGTTGGATGAGTAATCTAGCCACTTTACAATTATA
AGGAAAGAGGGAATGTTATA

Downstream 100 bases:

>100_bases
CTTTAATTTTTTTGTGGGTGTTTTGTGGGTGAATTACTCTTCTTTCAAATAAAAGTGTTTTACCCACAAAATAAAAAAAC
CCTTGATACCAGTCGTATCA

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MASFRKFGDVWEFRVRFKDPYTQKYKEKSKRGFKTKKEAQLAAAEEEKKLLNGLEVEITPTSLKHYLRDWLKLFKQDNVR
KNTFILHERNIEKHIIPYFQNMNIKELKPMMYQKFINSLTDQGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVIS
NKNNKEREGLKYMRSEDIPLFLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTITISKTLDFTAKTKEEL
FGDTKTFTSKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYEHELDLVFSRVDGKFLPKSTLFNAFSRILKKANLPRLEI
HSLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHISDKINKDSISGFEAYMNNVLG

Sequences:

>Translated_381_residues
MASFRKFGDVWEFRVRFKDPYTQKYKEKSKRGFKTKKEAQLAAAEEEKKLLNGLEVEITPTSLKHYLRDWLKLFKQDNVR
KNTFILHERNIEKHIIPYFQNMNIKELKPMMYQKFINSLTDQGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVIS
NKNNKEREGLKYMRSEDIPLFLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTITISKTLDFTAKTKEEL
FGDTKTFTSKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYEHELDLVFSRVDGKFLPKSTLFNAFSRILKKANLPRLEI
HSLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHISDKINKDSISGFEAYMNNVLG
>Mature_380_residues
ASFRKFGDVWEFRVRFKDPYTQKYKEKSKRGFKTKKEAQLAAAEEEKKLLNGLEVEITPTSLKHYLRDWLKLFKQDNVRK
NTFILHERNIEKHIIPYFQNMNIKELKPMMYQKFINSLTDQGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVISN
KNNKEREGLKYMRSEDIPLFLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTITISKTLDFTAKTKEELF
GDTKTFTSKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYEHELDLVFSRVDGKFLPKSTLFNAFSRILKKANLPRLEIH
SLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHISDKINKDSISGFEAYMNNVLG

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787607, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44656; Mature: 44525

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFRKFGDVWEFRVRFKDPYTQKYKEKSKRGFKTKKEAQLAAAEEEKKLLNGLEVEITP
CCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEH
TSLKHYLRDWLKLFKQDNVRKNTFILHERNIEKHIIPYFQNMNIKELKPMMYQKFINSLT
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DQGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVISNKNNKEREGLKYMRSEDIPL
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHCCCCCE
FLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTITISKTLDFTAKTKEEL
EEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHH
FGDTKTFTSKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYEHELDLVFSRVDGKFLPKS
CCCCHHHCCCCEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHH
TLFNAFSRILKKANLPRLEIHSLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHI
HHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHCCCEEEEHHHHHHHH
SDKINKDSISGFEAYMNNVLG
HHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ASFRKFGDVWEFRVRFKDPYTQKYKEKSKRGFKTKKEAQLAAAEEEKKLLNGLEVEITP
CCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEH
TSLKHYLRDWLKLFKQDNVRKNTFILHERNIEKHIIPYFQNMNIKELKPMMYQKFINSLT
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DQGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVISNKNNKEREGLKYMRSEDIPL
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHCCCCCE
FLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTITISKTLDFTAKTKEEL
EEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHH
FGDTKTFTSKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYEHELDLVFSRVDGKFLPKS
CCCCHHHCCCCEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHH
TLFNAFSRILKKANLPRLEIHSLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHI
HHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHCCCEEEEHHHHHHHH
SDKINKDSISGFEAYMNNVLG
HHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]