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The map label for this gene is splB [H]

Identifier: 52141291

GI number: 52141291

Start: 4077304

End: 4078329

Strand: Reverse

Name: splB [H]

Synonym: BCZK3959

Alternate gene names: 52141291

Gene position: 4078329-4077304 (Counterclockwise)

Preceding gene: 52141287

Following gene: 52141292

Centisome position: 76.94

GC content: 38.21

Gene sequence:

>1026_bases
ATGAAACCGTTTATGCCAAAACTTGTTTACTTTGAACCGAAGGCACTTGAATATCCACTCGGAAAAGAGTTGTATGAGAA
GTTTACGAAGATGGGATTAGAAATTCGTGAAACGACATCCCATAATCAAATTCGAAATTTGCCGGGTGAAAATGATTTGC
AAAAGTATCGTAATGCAAAAGCAACGCTTGTCGTTGGGGTGAGGAAGACATTAAAGTTTGATACGTCAAAACCGTCAGCT
GAATATGCAATTCCGCTTGCAACAGGATGTATGGGACATTGTCATTATTGTTACTTGCAAACGACACTTGGGAGTAAGCC
TTACGTTCGCGTGTATGTGAATCTTGATGAAATATTTGAGAAGGCACAGCAATATATGGATGAAAGAGCACCTGAAATAA
CAAGGTTTGAAGCGGCTTGTACATCAGATATCGTTGGGATCGATCATTTAACACATGCATTAAAGCGCGCGATCGAATTC
ATTGGAGAAAGTGAGCATGGGCGTTTACGTTTCGTTACGAAATATTCGCACGTTGATCATTTGTTAGATGCAAAACATAA
TGGGAAAACTCGTTTCAGGTTTAGTATTAATTCACGGTATGTAATTAAAAATTTTGAACCAGGGACATCACCGTTTGAAG
AAAGAATTGAAGCGGCTCGTAAAGTAGCAGGCGCGGGTTATCCACTTGGATTTATAGTGGCGCCGCTTTATATGCATGAA
GGATGGGAACAAGGATATCGTGAACTATTTGAGCGACTGTACAATGCATTAAAAGATTTGTCGATACCGAATTTAACATT
TGAATTAATTCAACATCGCTTTACAAAGCCAGCAAAAAAGGTCATTCAAGAGCGTTATCCGAATACGAAGCTTGAAATGG
ATGAAGAGAAGCGTAAATATAAATGGGGACGATATGGCATTGGGAAATACGTATATAAAAAAGATGATGCGGAAGTATTG
GAAGAAACGATAAGAGGTTATATATATGAGTTTTTCCCTGATGCAGAAATACAATACTTTACTTAA

Upstream 100 bases:

>100_bases
TATAACATTCAGTAACTTGCAACGCAAGTTACTGAAGTGGAAAACTTTAATGCGTGTTAATTTTTCAACGTTTCCCATAC
TAACGAGAGGAGGGAAGCAT

Downstream 100 bases:

>100_bases
GAGGAGTCTGTATGCAAATACAGATTCTTTTTTGTTTTATATATTTAGGCTTGTTTTCAACTTGTCACGTTATTCTTTCT
GGTGTATCATTTTATTGATT

Product: spore photoproduct lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKPFMPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLVVGVRKTLKFDTSKPSA
EYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFEKAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEF
IGESEHGRLRFVTKYSHVDHLLDAKHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHE
GWEQGYRELFERLYNALKDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGRYGIGKYVYKKDDAEVL
EETIRGYIYEFFPDAEIQYFT

Sequences:

>Translated_341_residues
MKPFMPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLVVGVRKTLKFDTSKPSA
EYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFEKAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEF
IGESEHGRLRFVTKYSHVDHLLDAKHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHE
GWEQGYRELFERLYNALKDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGRYGIGKYVYKKDDAEVL
EETIRGYIYEFFPDAEIQYFT
>Mature_341_residues
MKPFMPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLVVGVRKTLKFDTSKPSA
EYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFEKAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEF
IGESEHGRLRFVTKYSHVDHLLDAKHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHE
GWEQGYRELFERLYNALKDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGRYGIGKYVYKKDDAEVL
EETIRGYIYEFFPDAEIQYFT

Specific function: Involved in repair of UV radiation-induced DNA damage during spore germination. Can repair thymine dimer 5-thyminyl-5,6- dihydrothymine (known as spore photoproduct (SP)) by in situ monomerization of SP to two thymines [H]

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. SPL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004594 [H]

Pfam domain/function: NA

EC number: =4.1.99.14 [H]

Molecular weight: Translated: 39929; Mature: 39929

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFMPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAK
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHHCCCCCHHHHHHCCCC
ATLVVGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFE
EEEEEEEHHHHEECCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCEEEEEECHHHHHH
KAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
LLDAKHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHE
HHCCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GWEQGYRELFERLYNALKDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKY
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHH
KWGRYGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MKPFMPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAK
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHHCCCCCHHHHHHCCCC
ATLVVGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFE
EEEEEEEHHHHEECCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCEEEEEECHHHHHH
KAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
LLDAKHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHE
HHCCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GWEQGYRELFERLYNALKDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKY
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHH
KWGRYGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA