Click here to switch to the map view.

The map label for this gene is trx [H]

Identifier: 52140809

GI number: 52140809

Start: 4546233

End: 4546547

Strand: Reverse

Name: trx [H]

Synonym: BCZK4444

Alternate gene names: 52140809

Gene position: 4546547-4546233 (Counterclockwise)

Preceding gene: 52140806

Following gene: 52140808

Centisome position: 85.77

GC content: 34.6

Gene sequence:

>315_bases
ATGAAATCATTAGAAAGCATGGAGCAATTCCAAGAGTTAAAAAATGAAGAGAATGTAGTCTTTATGTTCTCAGCAGAATG
GTGTCCAGATTGCCGCTTTGTAGATCCATTTATGCCGGAAGTAGAAGAGAAATATAGTGATTTCTCATTTTACTATGTAG
ATCGTGACGAGTTTATTGATCTATGCGTAAAATTAGACGTATTTGGCATTCCGAGCTTTGTAGCGTACAATAAAGGTGAA
GAAACAGGTCGATATGTAAACAAAGATCGTAAAACACAAGAACAAATCGAAGAGTTCATTGAAGGTTTAAAATAA

Upstream 100 bases:

>100_bases
ATGAAAAGCAAGCATAAACCTTGCACCGTGCGCGATGTATGGTAGTATAAAAGAAAGATTATAACATGAAAAAATGCACT
CGTTAGAGGAGGAAATATAG

Downstream 100 bases:

>100_bases
GGCAATTTGCCAATTGAATTGTAAAACAACCTCTACCTTCGCGGGGGAGGTTATTTTTTTGGAAGGGAGGAAAAAAGAGA
TGAAGATGACAAGTAAAAAG

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKSLESMEQFQELKNEENVVFMFSAEWCPDCRFVDPFMPEVEEKYSDFSFYYVDRDEFIDLCVKLDVFGIPSFVAYNKGE
ETGRYVNKDRKTQEQIEEFIEGLK

Sequences:

>Translated_104_residues
MKSLESMEQFQELKNEENVVFMFSAEWCPDCRFVDPFMPEVEEKYSDFSFYYVDRDEFIDLCVKLDVFGIPSFVAYNKGE
ETGRYVNKDRKTQEQIEEFIEGLK
>Mature_104_residues
MKSLESMEQFQELKNEENVVFMFSAEWCPDCRFVDPFMPEVEEKYSDFSFYYVDRDEFIDLCVKLDVFGIPSFVAYNKGE
ETGRYVNKDRKTQEQIEEFIEGLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 12473; Mature: 12473

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLESMEQFQELKNEENVVFMFSAEWCPDCRFVDPFMPEVEEKYSDFSFYYVDRDEFID
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECHHHHHH
LCVKLDVFGIPSFVAYNKGEETGRYVNKDRKTQEQIEEFIEGLK
HHHHHHHCCCCHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSLESMEQFQELKNEENVVFMFSAEWCPDCRFVDPFMPEVEEKYSDFSFYYVDRDEFID
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECHHHHHH
LCVKLDVFGIPSFVAYNKGEETGRYVNKDRKTQEQIEEFIEGLK
HHHHHHHCCCCHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]