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The map label for this gene is trkA [H]

Identifier: 52140760

GI number: 52140760

Start: 4590616

End: 4591113

Strand: Reverse

Name: trkA [H]

Synonym: BCZK4493

Alternate gene names: 52140760

Gene position: 4591113-4590616 (Counterclockwise)

Preceding gene: 52140761

Following gene: 52140762

Centisome position: 86.61

GC content: 34.94

Gene sequence:

>498_bases
ATGAATATTCGAGAGAGTGAATTACCGGGTATTGGATGTAAGTTTGAAGTAATTACAAAAGGTAATGAAAAGCTGGTTAT
TGTTATTCATGATGATGGCCGAAGAGAAATGTATCATTTTGATGCAGATCATGATGAAAGTATTTCAAGTATTTCTCTTC
GTGATTCGGAAGCGAGACAAATTGCAGCTATATTGGGCGGAATGGTATATAGACCACAAGCGTTAGACACAATTGAGATG
GCTTTTGAAGGATTATCAATTGAATGGTTTAAGGTGGAAAATCATGCACCAGTCGTACAAAAAACAATTGGTAGCTTACA
TGTCAGAAAAACATATAACGTAACGATTATTGCTATTTTAAAAAAGAATATGAAGAAATTCTTTAATCCAGGACCAGACT
CTATTATTGAAGCTGGTGATATGCTTGTGTTATCGGGCGCGAGACATGAAGTGAAAAGAATTATTAATGAATTGCTTTCA
GCAGGAGGTGATTCATAA

Upstream 100 bases:

>100_bases
GACGCTCAAGTATTTGGGAATCTCAAAAGATGAAGAATTTAAAACAGAGATTGATGTCGATTTGTAAAAGCCGTAACTAA
AAACTTTAGGAGGCGGGAAT

Downstream 100 bases:

>100_bases
TCGATGGATACTTTAATCTTTGAAGTTGGAACTGCGTTAGTATTAGTAGCTTTTGCAGCTATCCTTGCTGCGAAGTTAAA
GTTCTCGATTATTCCGTTTC

Product: potasium uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNIRESELPGIGCKFEVITKGNEKLVIVIHDDGRREMYHFDADHDESISSISLRDSEARQIAAILGGMVYRPQALDTIEM
AFEGLSIEWFKVENHAPVVQKTIGSLHVRKTYNVTIIAILKKNMKKFFNPGPDSIIEAGDMLVLSGARHEVKRIINELLS
AGGDS

Sequences:

>Translated_165_residues
MNIRESELPGIGCKFEVITKGNEKLVIVIHDDGRREMYHFDADHDESISSISLRDSEARQIAAILGGMVYRPQALDTIEM
AFEGLSIEWFKVENHAPVVQKTIGSLHVRKTYNVTIIAILKKNMKKFFNPGPDSIIEAGDMLVLSGARHEVKRIINELLS
AGGDS
>Mature_165_residues
MNIRESELPGIGCKFEVITKGNEKLVIVIHDDGRREMYHFDADHDESISSISLRDSEARQIAAILGGMVYRPQALDTIEM
AFEGLSIEWFKVENHAPVVQKTIGSLHVRKTYNVTIIAILKKNMKKFFNPGPDSIIEAGDMLVLSGARHEVKRIINELLS
AGGDS

Specific function: Modulates the activity of the potassium/proton antiporter yhaU. The transporter is composed of the integral membrane protein yhaU and the regulatory protein khtT [H]

COG id: COG0490

COG function: function code P; Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037 [H]

Pfam domain/function: PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 18405; Mature: 18405

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRESELPGIGCKFEVITKGNEKLVIVIHDDGRREMYHFDADHDESISSISLRDSEARQ
CCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCEEEECCHHHHH
IAAILGGMVYRPQALDTIEMAFEGLSIEWFKVENHAPVVQKTIGSLHVRKTYNVTIIAIL
HHHHHCCHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCEEEEEECCEEEEEHH
KKNMKKFFNPGPDSIIEAGDMLVLSGARHEVKRIINELLSAGGDS
HHHHHHHCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIRESELPGIGCKFEVITKGNEKLVIVIHDDGRREMYHFDADHDESISSISLRDSEARQ
CCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCEEEECCHHHHH
IAAILGGMVYRPQALDTIEMAFEGLSIEWFKVENHAPVVQKTIGSLHVRKTYNVTIIAIL
HHHHHCCHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCEEEEEECCEEEEEHH
KKNMKKFFNPGPDSIIEAGDMLVLSGARHEVKRIINELLSAGGDS
HHHHHHHCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]