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The map label for this gene is glgB [H]

Identifier: 52140633

GI number: 52140633

Start: 4712054

End: 4713967

Strand: Reverse

Name: glgB [H]

Synonym: BCZK4621

Alternate gene names: 52140633

Gene position: 4713967-4712054 (Counterclockwise)

Preceding gene: 52140630

Following gene: 52140635

Centisome position: 88.93

GC content: 37.72

Gene sequence:

>1914_bases
GTGAAACGAGATGAGTTTCATACCGAAAAGTACTATGAAAGTTATAACATCTTTGGCGCACATATTGTGACGGAAGATGA
GATGCGAGGTGTACGATTTACAGTATGGGCTCCTCATGCGAAAGCAATGAGTGTTGTTGGAGATTTTAATGAATGGGATT
ATGAGCAACATAAGATGCTGCAAGTGACAGAAGAGGGAATTTGGTCCCTATTTATACCGCATATAGAAGAAAGAGAAATA
TATAAATATGCGATTGAAACGATGGCTGGTGATGTCATTTTTAAGGCAGATCCGTATGCTGTGTATGCAGAAGTAAGACC
GAATACGGCATCTGTAGTTTTTGATATAAAGGGATACGAATGGAATGATAAAAACTGGAGCCGTAAGAAAAAGAAAAAAT
CGGTTTATAAAGAAGCGATGACAGTTTATGAATTACATTTCGGTTCTTGGAAAAAGAAAGAAGATGGAACACTGTATTCT
TACAAAGAAATGGCAGAAGAACTCATTCCTTATGTGGTGGAACATCAATTTACACATATTGAAATTATGCCGCTTGTTGA
GCATCCATATGATCGTTCTTGGGGATATCAAGGGACGGGATATTATGCAGCAACGAGTAGATTCGGCACGCCACATGATT
TGATGCATTTTGTCGATGAATGTCATAAATATGGAATCGGTGTCATTTTAGATTGGGTGCCGGGGCATTTTTGTAAAGAT
GCTCACGGTTTATATTTGTTTGATGGGACACCGACTTATGAATATAAAGATAAAGATGTGCAAGAAAATCCAGTATGGGG
AACTGTCAACTTTGATTTAGGAAAGAGGGAAGTACGTAATTTCTTAATTTCAAATGCGTTATTTTGGATGAGATATTTCC
ATATTGATGGTTTCAGGGTGGATGCAGTTGCGAACATGCTGTACTGGAATAAAGAAGGACAAGAGCAAAGTAATGAGCAC
GCTGTTTCATTTTTACGAGAGTTAAATGAAGCGGTGTTTGCAGAGAATGAAGATTTTCTTATGACAGCAGAGGATTCAAC
AGCTTGGCCACTTGTAACAGCTCCAACATATGAAGGTGGGCTTGGATTCAATTACAAATGGAATATGGGCTGGATGAATG
ACGTGCTGAAATATATGGAATGTGCGCCAGAGTACAGAAAATATATTCATGATAAAATGACGTTCTCTTTACTATATGCT
TACTCTGAAAATTTCATATTACCGCTTTCTCATGATGAAGTCGTTCATGGGAAAAAGTCGTTATTAAATAAAATGCCAGG
AGACTACTGGGATAAGTTTGCTCAACTTCGTTTATTATATGGATATTTCTTTACTCACCCAGGAAAGAAATTACTTTTCA
TGGGAGGAGAATTCGGGCAGTTTGATGAGTGGAAAGACCTTGAAGATTTAGATTGGAATTTACATGATTTTGAAATGCAT
CGTTATATGCATGATTACTTTAAAGAGCTCATAGCATTGTATAAGCGCTCTAAACCACTTTGGCAGCTTGATCATTCGCC
TGAAGGATTCCAGTGGATTGATGCTAATAATAATGAGCAAAGTATTTTCTCTTTTATCCGCCAAGGGGATAAACAAGAAG
ATGCGTTAGTTGTCGTATGTAATTTTACGAAAGCTACATATGAAAACTATAAAGTAGGTGTACCAGATTTCGAGTATTAT
AACGAGATTTTAAACAGTGATGCTGAGCAATATGGCGGATCAGGGCAAGTGAATAAGAAACGTCTTAAGGCGATTCAAGA
ACCGTATCATAATCAAGCAGCACATGTAGAAATTACAATTCCACCATTTGGCGTATCCATATTACGACCAGTGAAGACGA
GAAAGGGGAGCAAAAAACAAGATGGCTCAAAAACAAAAGTGCGTAGCAATGTTACTAGCAGGGGGAAAAGGTAG

Upstream 100 bases:

>100_bases
ATTAACAAGGATATTTCAGTTTTTCGCAGAATTGGTAAAGTATAAAAAATTCTGTCATCTTAGTGAGGTGAGCATATTGA
GTGTAATAAATTGTGAAGAA

Downstream 100 bases:

>100_bases
TCGATTAAGTGCATTAACAAAAAATTTAGCCAAGCCAGCTGTTCCATTTGGTGGTAAATATCGCATTATTGATTTTACGC
TAAGTAACTGCGCGAATTCT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQHKMLQVTEEGIWSLFIPHIEEREI
YKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGTLYS
YKEMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPHDLMHFVDECHKYGIGVILDWVPGHFCKD
AHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDGFRVDAVANMLYWNKEGQEQSNEH
AVSFLRELNEAVFAENEDFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSLLYA
YSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGEFGQFDEWKDLEDLDWNLHDFEMH
RYMHDYFKELIALYKRSKPLWQLDHSPEGFQWIDANNNEQSIFSFIRQGDKQEDALVVVCNFTKATYENYKVGVPDFEYY
NEILNSDAEQYGGSGQVNKKRLKAIQEPYHNQAAHVEITIPPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR

Sequences:

>Translated_637_residues
MKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQHKMLQVTEEGIWSLFIPHIEEREI
YKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGTLYS
YKEMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPHDLMHFVDECHKYGIGVILDWVPGHFCKD
AHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDGFRVDAVANMLYWNKEGQEQSNEH
AVSFLRELNEAVFAENEDFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSLLYA
YSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGEFGQFDEWKDLEDLDWNLHDFEMH
RYMHDYFKELIALYKRSKPLWQLDHSPEGFQWIDANNNEQSIFSFIRQGDKQEDALVVVCNFTKATYENYKVGVPDFEYY
NEILNSDAEQYGGSGQVNKKRLKAIQEPYHNQAAHVEITIPPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR
>Mature_637_residues
MKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQHKMLQVTEEGIWSLFIPHIEEREI
YKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYEWNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGTLYS
YKEMAEELIPYVVEHQFTHIEIMPLVEHPYDRSWGYQGTGYYAATSRFGTPHDLMHFVDECHKYGIGVILDWVPGHFCKD
AHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDGFRVDAVANMLYWNKEGQEQSNEH
AVSFLRELNEAVFAENEDFLMTAEDSTAWPLVTAPTYEGGLGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSLLYA
YSENFILPLSHDEVVHGKKSLLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGEFGQFDEWKDLEDLDWNLHDFEMH
RYMHDYFKELIALYKRSKPLWQLDHSPEGFQWIDANNNEQSIFSFIRQGDKQEDALVVVCNFTKATYENYKVGVPDFEYY
NEILNSDAEQYGGSGQVNKKRLKAIQEPYHNQAAHVEITIPPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=639, Percent_Identity=27.0735524256651, Blast_Score=182, Evalue=9e-46,
Organism=Escherichia coli, GI1789839, Length=608, Percent_Identity=43.0921052631579, Blast_Score=513, Evalue=1e-146,
Organism=Caenorhabditis elegans, GI17554896, Length=645, Percent_Identity=25.5813953488372, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI32564391, Length=604, Percent_Identity=25, Blast_Score=159, Evalue=6e-39,
Organism=Saccharomyces cerevisiae, GI6320826, Length=663, Percent_Identity=26.2443438914027, Blast_Score=185, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28573410, Length=670, Percent_Identity=26.1194029850746, Blast_Score=196, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 75057; Mature: 75057

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQHKML
CCCCHHHHHHHHHCCCEEEEEEEEHHHCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHH
QVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYE
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCEEEEEEEECEE
WNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGTLYSYKEMAEELIPYVVEHQFTHI
ECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEE
EIMPLVEHPYDRSWGYQGTGYYAATSRFGTPHDLMHFVDECHKYGIGVILDWVPGHFCKD
EEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
AHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDGFRV
CCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEH
DAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAENEDFLMTAEDSTAWPLVTAPTYEGG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCC
LGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSLLYAYSENFILPLSHDEVVHGKKS
CCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCEEEECCCCHHHCCHHH
LLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGEFGQFDEWKDLEDLDWNLHDFEMH
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
RYMHDYFKELIALYKRSKPLWQLDHSPEGFQWIDANNNEQSIFSFIRQGDKQEDALVVVC
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEE
NFTKATYENYKVGVPDFEYYNEILNSDAEQYGGSGQVNKKRLKAIQEPYHNQAAHVEITI
ECCHHCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEE
PPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRDEFHTEKYYESYNIFGAHIVTEDEMRGVRFTVWAPHAKAMSVVGDFNEWDYEQHKML
CCCCHHHHHHHHHCCCEEEEEEEEHHHCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHH
QVTEEGIWSLFIPHIEEREIYKYAIETMAGDVIFKADPYAVYAEVRPNTASVVFDIKGYE
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCEEEEEEEECEE
WNDKNWSRKKKKKSVYKEAMTVYELHFGSWKKKEDGTLYSYKEMAEELIPYVVEHQFTHI
ECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEE
EIMPLVEHPYDRSWGYQGTGYYAATSRFGTPHDLMHFVDECHKYGIGVILDWVPGHFCKD
EEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
AHGLYLFDGTPTYEYKDKDVQENPVWGTVNFDLGKREVRNFLISNALFWMRYFHIDGFRV
CCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEH
DAVANMLYWNKEGQEQSNEHAVSFLRELNEAVFAENEDFLMTAEDSTAWPLVTAPTYEGG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCC
LGFNYKWNMGWMNDVLKYMECAPEYRKYIHDKMTFSLLYAYSENFILPLSHDEVVHGKKS
CCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCEEEECCCCHHHCCHHH
LLNKMPGDYWDKFAQLRLLYGYFFTHPGKKLLFMGGEFGQFDEWKDLEDLDWNLHDFEMH
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
RYMHDYFKELIALYKRSKPLWQLDHSPEGFQWIDANNNEQSIFSFIRQGDKQEDALVVVC
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEE
NFTKATYENYKVGVPDFEYYNEILNSDAEQYGGSGQVNKKRLKAIQEPYHNQAAHVEITI
ECCHHCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEE
PPFGVSILRPVKTRKGSKKQDGSKTKVRSNVTSRGKR
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA