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The map label for this gene is nudF [H]

Identifier: 52140600

GI number: 52140600

Start: 4753671

End: 4754177

Strand: Reverse

Name: nudF [H]

Synonym: BCZK4656

Alternate gene names: 52140600

Gene position: 4754177-4753671 (Counterclockwise)

Preceding gene: 52140601

Following gene: 52140599

Centisome position: 89.69

GC content: 41.03

Gene sequence:

>507_bases
ATGGAGAAACGAGGGAAAGTGTGGTTAGCTGTCAGTGGCCTAGTAGCTACAAAAGATGGAAGGTGGCTGTTCGTTAAGAA
AAAATACAGTGGATTAAAGGGGAAATGGTCTTTACCGGCTGGTTTTGTAAATGAAGGTGAGACGATTGATGAAGCTGTGA
AACGCGAAGTGTTAGAAGAGACAGGTATCGTCGCTCATGTGAAGGGGATCATTGGTGTTCGATCGGGCGTAATTCGCAAT
GAGATTAGTGATAATATGATTATTTTCCTTTTGGAACCTGAAGGGGAAAACATTATTGTACAGGAGAAGGAATTGTCTGA
AGTAGCGTTTCTACATCCAGATACGATTGCGGACGATCCAAATACGTCTGTGCTTATTACATATTTGTTAGAAAGAAAAT
CAGAATTACATCTTGAAATGGACAAAACATTAAATCCAGGAGAGCAGTTTGGTTATACGGCCTATCACGTATTTACAGCG
CATACGAAGGAGAGGGAGAAAGAGTGA

Upstream 100 bases:

>100_bases
GGCTAAGAGCTGTTTCTGCTTTTTTCATTTCAAAAATATAGTATAATATATAAAAAAGAAAGAATATTCTGTCCGTTCTA
GTGGAGGAGGGTATGACATC

Downstream 100 bases:

>100_bases
GTATACCGGTACTACTTATTTCAATGATGTTATTTTTTATTTTGTTTTTTGGAATTGGATTTTTACTCAATATGATATTG
CGCGCGACATGGGTAATGGT

Product: Nudix hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MEKRGKVWLAVSGLVATKDGRWLFVKKKYSGLKGKWSLPAGFVNEGETIDEAVKREVLEETGIVAHVKGIIGVRSGVIRN
EISDNMIIFLLEPEGENIIVQEKELSEVAFLHPDTIADDPNTSVLITYLLERKSELHLEMDKTLNPGEQFGYTAYHVFTA
HTKEREKE

Sequences:

>Translated_168_residues
MEKRGKVWLAVSGLVATKDGRWLFVKKKYSGLKGKWSLPAGFVNEGETIDEAVKREVLEETGIVAHVKGIIGVRSGVIRN
EISDNMIIFLLEPEGENIIVQEKELSEVAFLHPDTIADDPNTSVLITYLLERKSELHLEMDKTLNPGEQFGYTAYHVFTA
HTKEREKE
>Mature_168_residues
MEKRGKVWLAVSGLVATKDGRWLFVKKKYSGLKGKWSLPAGFVNEGETIDEAVKREVLEETGIVAHVKGIIGVRSGVIRN
EISDNMIIFLLEPEGENIIVQEKELSEVAFLHPDTIADDPNTSVLITYLLERKSELHLEMDKTLNPGEQFGYTAYHVFTA
HTKEREKE

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 18953; Mature: 18953

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRGKVWLAVSGLVATKDGRWLFVKKKYSGLKGKWSLPAGFVNEGETIDEAVKREVLEE
CCCCCCEEEEEECEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TGIVAHVKGIIGVRSGVIRNEISDNMIIFLLEPEGENIIVQEKELSEVAFLHPDTIADDP
CCCEEEHHHHHHHHCCHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCC
NTSVLITYLLERKSELHLEMDKTLNPGEQFGYTAYHVFTAHTKEREKE
CCCEEEEEEHHCCCCEEEEECCCCCCCHHCCEEEEEEEEECCHHCCCC
>Mature Secondary Structure
MEKRGKVWLAVSGLVATKDGRWLFVKKKYSGLKGKWSLPAGFVNEGETIDEAVKREVLEE
CCCCCCEEEEEECEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TGIVAHVKGIIGVRSGVIRNEISDNMIIFLLEPEGENIIVQEKELSEVAFLHPDTIADDP
CCCEEEHHHHHHHHCCHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCC
NTSVLITYLLERKSELHLEMDKTLNPGEQFGYTAYHVFTAHTKEREKE
CCCEEEEEEHHCCCCEEEEECCCCCCCHHCCEEEEEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]