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The map label for this gene is ltrC [H]

Identifier: 52140576

GI number: 52140576

Start: 4782821

End: 4783312

Strand: Direct

Name: ltrC [H]

Synonym: BCZK4681

Alternate gene names: 52140576

Gene position: 4782821-4783312 (Clockwise)

Preceding gene: 52140578

Following gene: 52140575

Centisome position: 90.23

GC content: 38.01

Gene sequence:

>492_bases
ATGAAAGAATCAAATCAACTACAAGAAAGAGCATTACAACTATTACAAGAACGCGGTGTAACAATTGACGATATTGCTGA
ACTTGTTCATTTTCTTCAAAAAAAATATCATCCAAATTTAGAGATGTCAGAATGCCGTTATAACGTTGAGCGTGTATTAT
CAAAACGTGAAGTACAAAACGCACTGATTACTGGTATCGAACTCGATGTCCTTGCTGAAAAAGGAATGTTAAGTGAGCCG
TTACAAGATATCGTAAAACGTGATGAAGGCTTATACGGAATTGATGAAGTAATCGCACTTTCTATCGTTAACGTGTACGG
CTCTATCGGCTTCACGAACTTTGGATATATCGATAAATTAAAACCTGGTATTTTAGAATACTTAAATGATAAATCAACTG
GAAAGGTGCATACATTCCTTGATGATATCGTTGGCGGAATTGCTGCTGCTGCTTCAAGCCGCTTAGCGCACAGAGCTGAG
CACTCGGAGTGA

Upstream 100 bases:

>100_bases
TTTCTTTATATATATGAGCTTGTGCTCGCCTTTCATTCCTATGCACATGATAAAGCAACGAAACGTATACAAATACTAAA
AAGAAAAAAAGGTGATAAAC

Downstream 100 bases:

>100_bases
AATATGAAAGACCGTCAGTGTCATACTGACGGTCTTTCATATTTCATGAGCATAAATTCTCTTCCGCGGCTCAAAAAAAT
AGGCCCTTGCTGAAAACCTA

Product: low temperature requirement C protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQNALITGIELDVLAEKGMLSEP
LQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKLKPGILEYLNDKSTGKVHTFLDDIVGGIAAAASSRLAHRAE
HSE

Sequences:

>Translated_163_residues
MKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQNALITGIELDVLAEKGMLSEP
LQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKLKPGILEYLNDKSTGKVHTFLDDIVGGIAAAASSRLAHRAE
HSE
>Mature_163_residues
MKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQNALITGIELDVLAEKGMLSEP
LQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKLKPGILEYLNDKSTGKVHTFLDDIVGGIAAAASSRLAHRAE
HSE

Specific function: Unknown

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ypjQ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: NA

Molecular weight: Translated: 18270; Mature: 18270

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQN
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ALITGIELDVLAEKGMLSEPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKL
HHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
KPGILEYLNDKSTGKVHTFLDDIVGGIAAAASSRLAHRAEHSE
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQN
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ALITGIELDVLAEKGMLSEPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKL
HHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
KPGILEYLNDKSTGKVHTFLDDIVGGIAAAASSRLAHRAEHSE
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]