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The map label for this gene is yocH [H]

Identifier: 52140325

GI number: 52140325

Start: 5030361

End: 5031245

Strand: Direct

Name: yocH [H]

Synonym: BCZK4935

Alternate gene names: 52140325

Gene position: 5030361-5031245 (Clockwise)

Preceding gene: 52140328

Following gene: 52140323

Centisome position: 94.9

GC content: 41.58

Gene sequence:

>885_bases
ATGGAGGCTATCATGAAAAAATTAATTGGAATAGCAACAGCAGCAGTTTTTGGTCTTGGGATTTTCACATCATCTGCTAA
TGCAGAAACTGTTGTAACAACAGACGTACTAAATGTACGCGAAAACCCTACTACTGAATCAAAAGTTGTCGGTAAATTAC
TAAACGGTAATAAAATAGATGTTCAAAATACAGAGAACGGATGGTCAAAAATCACTTTAGATGGTAAAGACGCATTCGTA
AGTGCAGAGTTCACAAAAAGCATCTACTACGTAACAGCTAACGTATTAAACGTACGTGCTGAAGCGAACACAGACTCAGA
AATCCTTGGAACGTTGAAGAAAGATGATATGATCGAAACAACGAACCAAGTACAAAATGAGTGGTTACAATTTGAATATA
ACGGGAAAACAGCTTACGTTCACGTTCCTTTCTTAACAGGTACAGCACCTGTTATTGAGAAACAAGAACAACCTGCTCCT
GCTAAAGCTGTAGCGCCAGCTAAAGCACCTGCAGCACAAGCAAAACAAGCTGCTAAGCCTGCTGTAAAAGCTGCTAACAC
TAGCGCACCTGCTGGTGGTCGTGAGTTAACAGTTGTAGCTACAGCATACACAGCTCATCCGAGCGAAAACGGTGGCACAT
ATGGCGGCCGTGTATTAACTGCAATGGGTCATGACTTAACAGCGAACCCAAACATGAAAATGATCGCTGTTGATCCGAAA
GTAATCCCATTAGGATCTAAAGTATGGGTAGAAGGTTACGGAGAAGCGATCGCTGGAGATACTGGCGGTGCAATTAAAGG
TAACCGTATCGACATCCTACTTGGATCAGATAGCGCTGCCCAAAAATGGGGCCGCAAAACTGTTAAAGTGAAAATTTTAA
AATAA

Upstream 100 bases:

>100_bases
TACAGCATGTTAACGACTTATTACGAATGGTTTGTAATTGTGTGTTTTCCCGAAATCCGAAAAAATCTGTTGCTATAATG
AGGACACGAAAACAAACGCA

Downstream 100 bases:

>100_bases
CCAATGACTGCTAAAGCCGGTTCTCTTTGTTGAGAGCTGGCTTTTATTTTTTTATAATAGCTATAAGGGGGCTATACTCA
TGAATGTACAAGCAAAAGTA

Product: enterotoxin/cell wall-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKIDVQNTENGWSKITLDGKDAFV
SAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPAP
AKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVLTAMGHDLTANPNMKMIAVDPK
VIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAQKWGRKTVKVKILK

Sequences:

>Translated_294_residues
MEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKIDVQNTENGWSKITLDGKDAFV
SAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPAP
AKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVLTAMGHDLTANPNMKMIAVDPK
VIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAQKWGRKTVKVKILK
>Mature_294_residues
MEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKIDVQNTENGWSKITLDGKDAFV
SAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPAP
AKAVAPAKAPAAQAKQAAKPAVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVLTAMGHDLTANPNMKMIAVDPK
VIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAQKWGRKTVKVKILK

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 31041; Mature: 31041

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKID
CHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEE
VQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIET
EEECCCCCEEEEECCCCEEEEHHHHCEEEEEEEEEEEEEECCCCCHHHHHHCCCCCHHHH
TNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPAPAKAVAPAKAPAAQAKQAAKP
HHHHHCCEEEEEECCCEEEEEEEEECCCCHHHCCCCCCCCCHHCCCCCCCHHHHHHHHCC
AVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVLTAMGHDLTANPNMKMIAVDPK
HHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCE
VIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAQKWGRKTVKVKILK
EEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCHHHHHCCCEEEEEEEEC
>Mature Secondary Structure
MEAIMKKLIGIATAAVFGLGIFTSSANAETVVTTDVLNVRENPTTESKVVGKLLNGNKID
CHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEE
VQNTENGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIET
EEECCCCCEEEEECCCCEEEEHHHHCEEEEEEEEEEEEEECCCCCHHHHHHCCCCCHHHH
TNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQEQPAPAKAVAPAKAPAAQAKQAAKP
HHHHHCCEEEEEECCCEEEEEEEEECCCCHHHCCCCCCCCCHHCCCCCCCHHHHHHHHCC
AVKAANTSAPAGGRELTVVATAYTAHPSENGGTYGGRVLTAMGHDLTANPNMKMIAVDPK
HHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCE
VIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDILLGSDSAAQKWGRKTVKVKILK
EEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCHHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]