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The map label for this gene is yebA [C]

Identifier: 51894461

GI number: 51894461

Start: 3551933

End: 3552982

Strand: Reverse

Name: yebA [C]

Synonym: STH3327

Alternate gene names: 51894461

Gene position: 3552982-3551933 (Counterclockwise)

Preceding gene: 51894462

Following gene: 51894460

Centisome position: 99.63

GC content: 68.0

Gene sequence:

>1050_bases
GTGCAGCTCATCGTCGTGCCATCCACCAACAGACGCAGTTACAGCTTTTTCGTCTACCCGGCCCTGCTGGCGGCGGGTCT
CGGGCTGGTCGTTCTGGTGGTGGCCGCCCTGGCGCTGGGCCTCCGGTTCTTCCAGACGGAGGCTGCCCGGCTCCGCGCTG
AGCTCGCCGAGATGGAGGCGCTGAAGCAGCAGGCCAGGCTCCAGCAGGAGGAGCTGGAGCGGATGCGGGCGACGGCGGAG
CAGGTCGAACAGGAACTGCAGGAGATCCGGCGGTTGGAAAAGGACCTGGAGCACATGACGGAGGGGGAGGACACCCTGCC
CTCCCGTTCAGCGCTCACCCGGCGCACGCCCCCCGGCGAGGGGGCGCGGGGCGGGCCCGAAACCAGCCACTCGCAGCAGG
TCCCGGGACTGACCCTGGCCAGCATCCTGCCGGACGACGTCAGTCCCTTTGTGCTGGGCAAGCGCAACACCCTGGCCATG
GACCTGAAGCTGGGGCGCCTGCCCTCCTCCATGGATTCCAGCCTGCAGAGCTCCAGGGCGGTACGGGCTCAACTGGCCAG
GCAACTGGCCCAACTTCGGGACTCGGTACGCGCACTGGCCGACGGCAGGGACCAGCTGGCGGCCAAGTTGGACTACCTGG
CGCACAAACCGGCCGGATGGCCGGTGTACGGCGCGGAGATCACCGACCCGTTCGGGCCGCGCTGGAGCCCCTTCGGCTAT
GGCTGGCAGTTCCACGACGGCATCGACCTGGGCCAGGACTACGGCACCCCGGTCTACGCCACCGGGGCCGGAACGGTGGT
CTACGCTGACTGGCTCGAAGGCGGATACGGCCGATGCGTCATCATCGACCACGGGTACGGCTACCGCACGCTCTACGCCC
ACCTCCAGGACTGGAACGTGTTCGAGGGGCAGGAAGTGGAGCGCGGTGACCTGATCGGCTGGGTGGGCAGCAGCGGCCTC
AGCACCGGACCGCACCTGCATTACGAAGTGCTGGTGAACGGTGTGGCCGTAGACCCCGAACCGTACCTAGAATCGAGACC
GGAGGAATGA

Upstream 100 bases:

>100_bases
TTGAATCCCCACATTGCCTGTTTGTCTGTTTCGGGCCGCAGGCCAACACGAGGAACGCGAACGAAAGGAGCGAGACCCGG
TGCCGCGTCGGGCAGGACGA

Downstream 100 bases:

>100_bases
CCGTGTTCGGCAGTCGCAAGAAATCCACGGCGGACAACCTGTCCCACGGCAAGATCGAGACGCTGATCGGCGAGGGCACG
CAGATCAAGGGAACGTTCCA

Product: putative peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MQLIVVPSTNRRSYSFFVYPALLAAGLGLVVLVVAALALGLRFFQTEAARLRAELAEMEALKQQARLQQEELERMRATAE
QVEQELQEIRRLEKDLEHMTEGEDTLPSRSALTRRTPPGEGARGGPETSHSQQVPGLTLASILPDDVSPFVLGKRNTLAM
DLKLGRLPSSMDSSLQSSRAVRAQLARQLAQLRDSVRALADGRDQLAAKLDYLAHKPAGWPVYGAEITDPFGPRWSPFGY
GWQFHDGIDLGQDYGTPVYATGAGTVVYADWLEGGYGRCVIIDHGYGYRTLYAHLQDWNVFEGQEVERGDLIGWVGSSGL
STGPHLHYEVLVNGVAVDPEPYLESRPEE

Sequences:

>Translated_349_residues
MQLIVVPSTNRRSYSFFVYPALLAAGLGLVVLVVAALALGLRFFQTEAARLRAELAEMEALKQQARLQQEELERMRATAE
QVEQELQEIRRLEKDLEHMTEGEDTLPSRSALTRRTPPGEGARGGPETSHSQQVPGLTLASILPDDVSPFVLGKRNTLAM
DLKLGRLPSSMDSSLQSSRAVRAQLARQLAQLRDSVRALADGRDQLAAKLDYLAHKPAGWPVYGAEITDPFGPRWSPFGY
GWQFHDGIDLGQDYGTPVYATGAGTVVYADWLEGGYGRCVIIDHGYGYRTLYAHLQDWNVFEGQEVERGDLIGWVGSSGL
STGPHLHYEVLVNGVAVDPEPYLESRPEE
>Mature_349_residues
MQLIVVPSTNRRSYSFFVYPALLAAGLGLVVLVVAALALGLRFFQTEAARLRAELAEMEALKQQARLQQEELERMRATAE
QVEQELQEIRRLEKDLEHMTEGEDTLPSRSALTRRTPPGEGARGGPETSHSQQVPGLTLASILPDDVSPFVLGKRNTLAM
DLKLGRLPSSMDSSLQSSRAVRAQLARQLAQLRDSVRALADGRDQLAAKLDYLAHKPAGWPVYGAEITDPFGPRWSPFGY
GWQFHDGIDLGQDYGTPVYATGAGTVVYADWLEGGYGRCVIIDHGYGYRTLYAHLQDWNVFEGQEVERGDLIGWVGSSGL
STGPHLHYEVLVNGVAVDPEPYLESRPEE

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=45.6140350877193, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082297, Length=126, Percent_Identity=38.8888888888889, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87082174, Length=132, Percent_Identity=34.8484848484849, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789099, Length=127, Percent_Identity=37.007874015748, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38518; Mature: 38518

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIVVPSTNRRSYSFFVYPALLAAGLGLVVLVVAALALGLRFFQTEAARLRAELAEMEA
CEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQQARLQQEELERMRATAEQVEQELQEIRRLEKDLEHMTEGEDTLPSRSALTRRTPPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
GARGGPETSHSQQVPGLTLASILPDDVSPFVLGKRNTLAMDLKLGRLPSSMDSSLQSSRA
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHH
VRAQLARQLAQLRDSVRALADGRDQLAAKLDYLAHKPAGWPVYGAEITDPFGPRWSPFGY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCC
GWQFHDGIDLGQDYGTPVYATGAGTVVYADWLEGGYGRCVIIDHGYGYRTLYAHLQDWNV
CEEECCCCCCCCCCCCCEEECCCCCEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHCCCC
FEGQEVERGDLIGWVGSSGLSTGPHLHYEVLVNGVAVDPEPYLESRPEE
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECEEECCCHHHCCCCCC
>Mature Secondary Structure
MQLIVVPSTNRRSYSFFVYPALLAAGLGLVVLVVAALALGLRFFQTEAARLRAELAEMEA
CEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQQARLQQEELERMRATAEQVEQELQEIRRLEKDLEHMTEGEDTLPSRSALTRRTPPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
GARGGPETSHSQQVPGLTLASILPDDVSPFVLGKRNTLAMDLKLGRLPSSMDSSLQSSRA
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHH
VRAQLARQLAQLRDSVRALADGRDQLAAKLDYLAHKPAGWPVYGAEITDPFGPRWSPFGY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCC
GWQFHDGIDLGQDYGTPVYATGAGTVVYADWLEGGYGRCVIIDHGYGYRTLYAHLQDWNV
CEEECCCCCCCCCCCCCEEECCCCCEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHCCCC
FEGQEVERGDLIGWVGSSGLSTGPHLHYEVLVNGVAVDPEPYLESRPEE
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECEEECCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]