| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is mltD [C]
Identifier: 51894401
GI number: 51894401
Start: 3487118
End: 3488482
Strand: Reverse
Name: mltD [C]
Synonym: STH3267
Alternate gene names: 51894401
Gene position: 3488482-3487118 (Counterclockwise)
Preceding gene: 51894402
Following gene: 51894400
Centisome position: 97.82
GC content: 75.9
Gene sequence:
>1365_bases ATGGTCTTCTACTTCGTGCAGCCAGGGGAGACGCTGTTCGCCATCGCCAGGCGTTACCGGACCACCGTTCACGCCCTGGT CACCGCCAACCGGCTGAAGGATCCCAACGCCATCAGCCCGGGCCAGGCGCTGCTGATCCCCCGCCCCGGAGAGCGGCCGT CGCCGCCACCGGGGGGCGTCGTGCACCGCGTGCGCAGGGGCGAGACGGCCCTGACCCTGGCGGCCCGCTACGGGACCACG GTGAAGGCCATCATGCTGGCCAACCAGCTGGCTCACCCGGAGTTCGTCGAGCCGGGTCAGCGGCTGGTGATCCCGGAGCC GCCGGAGCCGGGGACCGACTGGCCCATGCTGGGGCGGGACCCCCGCCGCGCATCGGACAGCCCGGCGGCGCCGGCCTCGC CCCCCAGCCACCGGTGGACCCGCCGTGCAGCGGCATCCAGAGGCTTCTGCCCGTCCGCGCCGGTGACCCGGTACGGCCTC GTCTACGTGGGCCTGGGCGACGGCGTCTACCGCGCGCTGGACCAGCGGACGGGCGCGGTGCGGTGGCGGGCCGGCGCCCC GGCGGCGCGGGCCGGCGGTGGGAGCGGGGAGGGGTTCGGCGCCGCCGCGTTGCCCGCCCCGGTGGTCTACGACGGACTCG CCTACTACTGCGTTCCCGGCGGCCCCCTGCGAGCGGTGGACGCCCGCAAGGGCGCGGAAATCTGGCAGGTGGCGCCGGCA GACGCCCTGAGCACCCCCCTGGCCGGGGACGGCATCGTGTACTGCGGTCACGAAGGCGGCGTGGTGGCGGTGGAGGCGAA GACCGGCGCCCTGGCCTGGAACGCCCGGCTGGACGGCGGGGTGGCGCAGCCTGTGGCCCTGGGCGACGGCCGGTTGTTCG CCGCCACCGAGGCGGGGACGCTCTGGGCGCTGGACGCGCTCACCGGCGAGCCGCTCTGGCGGGCGGAGGCGGCCGCAGGC GCACCCGTCTTTGCGGAACTGGTGGTAGCCCTGGGCGGCCAGGCGTTTGACGCGCTGACCGGGGAGCTCATCTGGCGCCG GACCGACCTCGGCGGCACCCCGGCGGTGCGCGGGGAAGCCGTCTGCTACCCAGGACGCTGGGTCGACCTGTTCACGGGCC GCACGGTGGCGGAGGCCGACGGCGAGGCGCCGCCGGCCGGGGCGCCGCACCTGCTGGCCGGGGATCTCCACCTCTGGGTC ACGCCCGAGCCGGCTCTGGTCGCCTGGGACGCAGCCCGAAGGGAGCTGCGCTGGTCCGTTCCCCTGCCGGCCCCCGCGGT GGCCATGGCGCCCGCGGACGGGTGGATCTTCGTGACCCTGGCGGACGGCTCGCTGGCGGCCTACAGCACGACCGCATCGG AATGA
Upstream 100 bases:
>100_bases CGCCGTGGACAGTTTTCGCGCGACGAACAGGAAAAATCTCCACGTGCAGACCGCCGGGCCCGGACCTGCGTAGCATGGGG AAAAAGACGGAGGTCGGGGT
Downstream 100 bases:
>100_bases GCCTGCGGACTCGCTGCATGTCGCGCACGCCTGGCAGGGAGACTAGGGGTGATCGACGGCAGACGAGGGAGGAGTGGCTG TGCACAGGTGGCTGAAGTGG
Product: hypothetical protein
Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]
Alternate protein names: Glycoside Hydrolase Family; Spore Coat Assembly Protein SafA; Peptidase M; Spore Peptidoglycan Hydrolase; Pyrrolo-Quinoline Quinone; LysM Repeat-Containing Protein
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGVVHRVRRGETALTLAARYGTT VKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRDPRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGL VYVGLGDGVYRALDQRTGAVRWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGTLWALDALTGEPLWRAEAAAG APVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEAVCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWV TPEPALVAWDAARRELRWSVPLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE
Sequences:
>Translated_454_residues MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGVVHRVRRGETALTLAARYGTT VKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRDPRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGL VYVGLGDGVYRALDQRTGAVRWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGTLWALDALTGEPLWRAEAAAG APVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEAVCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWV TPEPALVAWDAARRELRWSVPLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE >Mature_454_residues MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGVVHRVRRGETALTLAARYGTT VKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRDPRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGL VYVGLGDGVYRALDQRTGAVRWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGTLWALDALTGEPLWRAEAAAG APVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEAVCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWV TPEPALVAWDAARRELRWSVPLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE
Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]
COG id: COG3858
COG function: function code R; Predicted glycosyl hydrolase
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 47384; Mature: 47384
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGV CEEEEECCCHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHH VHRVRRGETALTLAARYGTTVKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRD HHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCC PRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGLVYVGLGDGVYRALDQRTGAV CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCE RWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCEEEECCCCCCCEEEECCC DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGT HHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCEEEEECCCC LWALDALTGEPLWRAEAAAGAPVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEA EEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCE VCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWVTPEPALVAWDAARRELRWSV EEECCCEEEEECCCEEECCCCCCCCCCCCCEEECCEEEEECCCCCEEEECCCCCCEEEEC PLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE CCCCCCEEECCCCCEEEEEEECCCEEEEECCCCC >Mature Secondary Structure MVFYFVQPGETLFAIARRYRTTVHALVTANRLKDPNAISPGQALLIPRPGERPSPPPGGV CEEEEECCCHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHH VHRVRRGETALTLAARYGTTVKAIMLANQLAHPEFVEPGQRLVIPEPPEPGTDWPMLGRD HHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCC PRRASDSPAAPASPPSHRWTRRAAASRGFCPSAPVTRYGLVYVGLGDGVYRALDQRTGAV CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCE RWRAGAPAARAGGGSGEGFGAAALPAPVVYDGLAYYCVPGGPLRAVDARKGAEIWQVAPA EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCEEEECCCCCCCEEEECCC DALSTPLAGDGIVYCGHEGGVVAVEAKTGALAWNARLDGGVAQPVALGDGRLFAATEAGT HHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCEEEEECCCC LWALDALTGEPLWRAEAAAGAPVFAELVVALGGQAFDALTGELIWRRTDLGGTPAVRGEA EEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCE VCYPGRWVDLFTGRTVAEADGEAPPAGAPHLLAGDLHLWVTPEPALVAWDAARRELRWSV EEECCCEEEEECCCEEECCCCCCCCCCCCCEEECCEEEEECCCCCEEEECCCCCCEEEEC PLPAPAVAMAPADGWIFVTLADGSLAAYSTTASE CCCCCCEEECCCCCEEEEEEECCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA